| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5838 |
|---|
| Symbol | |
|---|
| ID | 8362018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 7419331 |
|---|
| End bp | 7419831 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644967977 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003125458 |
|---|
| Protein GI | 256424805 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.80795 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACACG TTCTCTTATT CTTTGCATTG CTGGCGGGCA CCAGCAGCTT TGTATCCGCA
CAGGAAAAGA AAGCGCCGCA AAGTCCACGC GTGACAGCTG AAGGAAAAAA TGTTACAGTT
GCCTACGGAC AACCGGCTAA GAAAGGCAGA GTTATCTTTG GTGAGCTGGT ACCTTATGGT
AAAGTATGGC GTTTAGGCGC TAACGAAGCG ACTGAAATCA CTTTTGCAAA AGACGGTAGC
TTTGGTGGTA AACCTGTAAA AGCGGGTACT TATACTTTGT TCACTATTCC GGAAGCAAAC
GAATGGACAT TCATTCTGAA CAGCGAACTG AAACAGTGGG GTGCTTACAA ATATGAGGAG
ATCAAAGGAA AAAATGTACT GGAAGTAAAA GCGAAAGCTA CTAAGACCAA AGCACCTGTT
GAAAAACTCA CGCTCACTGT ACCGGCTAAT AAACTGGTAG TAGAATGGGA TGAAACCCAT
GTTGAAGTGC CTGTAAAATA A
|
|---|
| Protein sequence | MKHVLLFFAL LAGTSSFVSA QEKKAPQSPR VTAEGKNVTV AYGQPAKKGR VIFGELVPYG
KVWRLGANEA TEITFAKDGS FGGKPVKAGT YTLFTIPEAN EWTFILNSEL KQWGAYKYEE
IKGKNVLEVK AKATKTKAPV EKLTLTVPAN KLVVEWDETH VEVPVK
|
|---|
| |