Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5815 |
Symbol | |
ID | 8361995 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7389182 |
End bp | 7389745 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644967954 |
Product | isochorismatase hydrolase |
Protein accession | YP_003125435 |
Protein GI | 256424782 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.28995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00617884 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCAACA ACACAAACAA CACCGCTTTA CTGGTAATGG ATATGCAGAA CGCTATGTTG TCCTCCTTCC CGGAAGGCAC TGCCGTTACC GCTAACGTGG CCAAAGCGAT CGGCAACGCC CGCAGCAAAG GAGTACCGGT GATCTATGTA GTCGTCGGTT TCAGACAAGG CGCACCTGAA ATCAGTAGCA ACAACAAGGT ATTCACAGAA AACAAAGCAC GGTTTTCCAA TATAAACTTT GCCGATTTCA CCGCCATACA TCCCGACCTC ACTCCACAGG AGCAGGAACC GGTAGTTGTA AAACGTCGTT TCAGCGCCTT TACCGGCAGC GACCTGGAAG TACTGCTGAG AAGCTTACAC ATCGATCATA TCGTATTGAC TGGTATAGTA ACCAGCGGAG TTGTCCTGTC TACCCTGAGA GAAGCGGCCG ACAAAGACTA TCGTATCACT GTATTGTCCG ATGGCTGTGC AGACCGCGAA ACAGAAGTAC ACGAGTTCTT AATGAACAGG ATATTCCCGC ATCAGTCCGA AGTAATCACA GTTGCTGAAT GGAATAATGC CTGA
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Protein sequence | MSNNTNNTAL LVMDMQNAML SSFPEGTAVT ANVAKAIGNA RSKGVPVIYV VVGFRQGAPE ISSNNKVFTE NKARFSNINF ADFTAIHPDL TPQEQEPVVV KRRFSAFTGS DLEVLLRSLH IDHIVLTGIV TSGVVLSTLR EAADKDYRIT VLSDGCADRE TEVHEFLMNR IFPHQSEVIT VAEWNNA
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