Gene Cpin_5798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5798 
Symbol 
ID8361978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7365379 
End bp7365672 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content43% 
IMG OID644967938 
ProductCalcium-binding EF-hand-containing protein 
Protein accessionYP_003125419 
Protein GI256424766 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA TTTTTGTTGC CGCGATACTG TTTACAGCAC TGAGCACTGT TAAGACATAT 
GCACAGGATC AGCAGCCTAA GCCAAAACAT GAAGGTCTGT TCCAGAAATT GGATACTGAC
GGTGATGGCA AGATCAGCAA GGCGGAGGCA GACAAACAGG AGAAGGGCAG ATTTAATCTG
AAAGAGAAAT TTGATGCTAT TGACGCTAAC AAGGATTCAT ATATTGACAA GGAAGAACTG
AAAGCGTACA GAAAAAGCCA GAAGGAGAAG AGAGAAGCTG CTGGCAAGAA GTAG
 
Protein sequence
MKKIFVAAIL FTALSTVKTY AQDQQPKPKH EGLFQKLDTD GDGKISKAEA DKQEKGRFNL 
KEKFDAIDAN KDSYIDKEEL KAYRKSQKEK REAAGKK