Gene Cpin_5737 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5737 
Symbol 
ID8361917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7298188 
End bp7298823 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content51% 
IMG OID644967878 
ProductABC transporter related 
Protein accessionYP_003125359 
Protein GI256424706 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGGA TCGCGGACTT TAAGAAATCA TACAACCAAC ACCCGGTATT AGCTGTTCCT 
TCCCTGGAAC TGGGCGCCGG CATTCACTGG ATCAAAGGCG TGAATGGTTC CGGTAAAAGC
ACACTCCTGA AAGCGATTGC AGGTATTATT GATTTCTCCG GTGATATCCT CCTGGACAAT
GTCAGCATCA GGCAACAGCC TGTCGACTAT CGTAAGAAAG TCAACTTCGC GGAAGCAGAA
CCGGTATTCC CGGAATTTCT TACGGGAAGG GAAATGATCC GGCTCTTTGC AACGGCGAAA
CAAGCGCCTG CCGGACAAGA AGTACCTTAC CTGGAAAGTA TGCAGATGCA GTCCTATCTT
GATCAACCGC TGGGCAGCTA TTCCAGTGGT ATGCTCAAAA AACTGTCCCT GGTACTGGCC
TTTACCGGTA CGCCACGGCT GATACTGCTG GACGAACCGC TGATCACACT CGATACCGCC
TCCCTGGATA TCTTGTATAA CTGGATCAGG GAACGGTATA CTGCGCAGGG AACATCCTTC
CTGCTATCCT CCCATCAGCC TATCGAACAG GATGCATTGG TAGTCAACAG TGTGCTCCTG
ACAGCAGATA AAACCGTAAA ACAGCTCGCA GGATGA
 
Protein sequence
MLRIADFKKS YNQHPVLAVP SLELGAGIHW IKGVNGSGKS TLLKAIAGII DFSGDILLDN 
VSIRQQPVDY RKKVNFAEAE PVFPEFLTGR EMIRLFATAK QAPAGQEVPY LESMQMQSYL
DQPLGSYSSG MLKKLSLVLA FTGTPRLILL DEPLITLDTA SLDILYNWIR ERYTAQGTSF
LLSSHQPIEQ DALVVNSVLL TADKTVKQLA G