| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5701 |
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| Symbol | |
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| ID | 8361881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7269079 |
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| End bp | 7269645 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644967844 |
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| Product | NLI interacting domain protein |
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| Protein accession | YP_003125325 |
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| Protein GI | 256424672 |
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| COG category | [K] Transcription |
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| COG ID | [COG5190] TFIIF-interacting CTD phosphatases, including NLI-interacting factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.884506 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGGACA AATCAGATAA ACTCTTATTG CTTGATCTCG ACGAAACCTT GATACATGCG
ACGACTGCTC CCCTGGGAGT TGCGCCGGAC CTGCAATTTG ATGTGTTTCA TATTTATAAA
CGTCCGGGGT TGGAACACTT TCTTATAAAT ATATCCCAAC ATTTTACGAT AGGCGTGTGG
AGTTCTGCAA GCAATGAATA TGTGGAGGAG ATCGTGAAAA TGATCACGCC GGATTCAATT
GAGTGGTTTA TGATCTGGGG TAAAAGCAGG TGTACGATCA GGCGGGATTA TGAACTGGAC
AGCTACTATT TTGAGAAGCG GCTGGATAAA GTAAAAAATA AGGGGTTCAG GCTGGAGCAG
ATCATTATCG TTGATGATTC ACCGGAAAAG TCGAGGAGTA ATTATGGTAA TGCGGTGTAT
ATCGCACCAT TTGAAGGAGA CCGGAATGAT AATGAGCTTA CACATCTGTA TGATTATCTC
CTGACGTTGA AGGAGGTAAG TAATATACGC AGTATTGAAA AACGGGGTTG GCGTAATAAC
CCGTTTACGT CTTTGAATAT TTCTTAG
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| Protein sequence | MPDKSDKLLL LDLDETLIHA TTAPLGVAPD LQFDVFHIYK RPGLEHFLIN ISQHFTIGVW
SSASNEYVEE IVKMITPDSI EWFMIWGKSR CTIRRDYELD SYYFEKRLDK VKNKGFRLEQ
IIIVDDSPEK SRSNYGNAVY IAPFEGDRND NELTHLYDYL LTLKEVSNIR SIEKRGWRNN
PFTSLNIS
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