Gene Cpin_5698 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5698 
Symbol 
ID8361878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7266191 
End bp7266955 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content42% 
IMG OID644967841 
Productmethionine aminopeptidase, type I 
Protein accessionYP_003125322 
Protein GI256424669 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.475075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.56742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATAA CAAAAGAATC TGAACTGATA GGAATGCAGA GAGCGAGTGA GGCGGTTGCA 
TATACCTTAA AAGAAATGAG GACCTATGCG CAACCAGGGA TGAGTACGAA AGAGCTTGAC
CAATATGGGG CTAAGATACT ATCCAGCATG GGTGCGAAGT CTGCGCCATA TTTAACATAT
GGATTTCCGG GATACACCTG CATTAGTGTT GATAATGAGT TTTGTCATGG TATTCCTTCA
GAGAAACGTA TTCTAAAAGA AGGAGATCTG ATCAATATTG ATGTATCAGC AGAGCTGGAT
GGTTTCTGGG CGGATAATGG CGGTTCATTT GTGCTGGGTA ATGATATTCA CCAGCATCAG
AAGTTGGTGG ATGCATCCAG GGAAATATTA AGAAAGACCC TTGATAATAT CAGAGGGGGT
GTGAAAATAG CGGATATCGG GCATCTGATG GAAACGGAGG CGAAGAAGAG AGGTTTTAAA
GTGATTAAAA ATCTTGGCGG GCATGGTATC GGAAGAGGGC TACACGAAGA ACCGGGAGAG
TTAATGAATT ATAAGAACCG CTTTGATGTA AGACGCTTTA AAAAGAATTC TGTTGTAGCG
ATAGAAACGT TTATTTCCAC CAGTTCGACC TATGCGACAG AACTGAATGA CGGATGGACG
ATGGTAGGCA ATAAAGGCGG TTATATGGCG CAGCATGAGC ATACCATTGT AGTTACTGAT
GGAAAGCCGA TTATCTTAAC GGAGATGAAT GAAATATTTA ACTAA
 
Protein sequence
MSITKESELI GMQRASEAVA YTLKEMRTYA QPGMSTKELD QYGAKILSSM GAKSAPYLTY 
GFPGYTCISV DNEFCHGIPS EKRILKEGDL INIDVSAELD GFWADNGGSF VLGNDIHQHQ
KLVDASREIL RKTLDNIRGG VKIADIGHLM ETEAKKRGFK VIKNLGGHGI GRGLHEEPGE
LMNYKNRFDV RRFKKNSVVA IETFISTSST YATELNDGWT MVGNKGGYMA QHEHTIVVTD
GKPIILTEMN EIFN