Gene Cpin_5688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5688 
Symbol 
ID8361868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7256989 
End bp7257954 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content49% 
IMG OID644967831 
Productaldo/keto reductase 
Protein accessionYP_003125312 
Protein GI256424659 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.871424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATG AATTATTTGG CACACAGACA GGTATAATGG CCAGCAGGCT TGTATTGGGA 
GCAGCTAACC TGGGCGGTCG CAGGGGGTAT GGCGCGGCGG AAGATGATAT ACCAAAGATC
CTGGCAGCCT ATGCAGATGC CGGTGGAAAT TTTATTGACG TAGCCGATCA ATATCAGCTG
GGAGAAGCGG AAGAAAATGT CGGAAGATTT ATTAATGGTC AACGCCATAA TTTTATCATC
TGTACAAAAT ATACCCGTAG CAGTGAAGCG ATACCTACGC CTGTCAATTT AGGGAACCAT
CGTAAAGCGA TGCGGCAGGC GGTTGATGCC AGTCTGAAGC GACTGAACAC GGATTATATT
GACATCTATA TGCCGCATTA TGATGATGGT CTGACGCCGA TCGGGGAAAT AGTAAGGGGG
CTGGAAGACC TGGTAAAAGC CGGGAAGATC CTGTATACCG GTCTGGCTAA TTTTCCGGCG
TGGAAAGCAG CGGCTATTGC CAGCAGTATT CCCGTAGCGG CATTACAGAT CGAGTATAAT
TTAGTGCAAC GGACGGCTGA ACGGGAACTG ACACCGATGG CGGATTACTT TGGTATGGGT
ACGATGTTTT ATTCTCCGCT GGCAGGAGGA CTGCTAACCG GCAAATACAG AAAAGGCGCC
GGTGGACGGC TTACACTTGC TACTCATGAC GCCTACCAGG AAGCGGTAAC AGTTACACCT
GTTATCGATG CATTGGAAGA GATTGCGGCA GTGGTGAATG CTACGCCTGG TCAGGTGGCA
TTGGCGTGGA CATTGACGAA AAAAGGGTTT CCGGTGATCG GCGCCAGGAC ATTAGTACAC
CTGCAGGATA ATCTGACGGC GCTCGGGATA GTATTGAGTA CGGAGCAGAT TGACCGCTTA
GACAAGATTA CTGAAATTAG TATGGGCTAC CCCCATGATC TGCTTAAAAC AGTACAGGTG
AAGTAA
 
Protein sequence
MKHELFGTQT GIMASRLVLG AANLGGRRGY GAAEDDIPKI LAAYADAGGN FIDVADQYQL 
GEAEENVGRF INGQRHNFII CTKYTRSSEA IPTPVNLGNH RKAMRQAVDA SLKRLNTDYI
DIYMPHYDDG LTPIGEIVRG LEDLVKAGKI LYTGLANFPA WKAAAIASSI PVAALQIEYN
LVQRTAEREL TPMADYFGMG TMFYSPLAGG LLTGKYRKGA GGRLTLATHD AYQEAVTVTP
VIDALEEIAA VVNATPGQVA LAWTLTKKGF PVIGARTLVH LQDNLTALGI VLSTEQIDRL
DKITEISMGY PHDLLKTVQV K