| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5685 |
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| Symbol | |
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| ID | 8361865 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7253567 |
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| End bp | 7255888 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644967828 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003125309 |
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| Protein GI | 256424656 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0785655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.623805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTGT ATAAATATAT TATACTGGTT GTAATATTAT TATCTGATAT TACCACCTAT
GCACAAACAA CCGGCACCAA AAACACCACT GCTACGTTTA ATGTTGCCGG CGTCTGCGAA
CAATGTAAAG CCCGTATCGA AGATGCTGCC ATCGGTAAAG GTGTTTTATC CGCCGAGTGG
GATCTCGGCA CGAAAGAAAT CAAAGTCGTC TACGATAGTC TGAAAACCTC CCTGGAGAAA
ATACAAAAGC GAATCGTAGC TGCCGGCCAT GACCTGCAGA CAGCCCATGC ACCGGATAAC
GTATACAATA AGTTACCAGC ATGCTGCCAT TACCGCGAAT CTGAAGCGAT GGTCCATGAC
TCAAAAATTG AAACAGCTTC AAAGGTGCAG TTAAAGGAGT TCAGCGTAAC ATCTAAACAA
ACAAGCACCT ATATCTCCGC ATTGAATACC GTACGTACAG AGACAATTAC CAGTAAGGAA
CTCCTGAAAG CAGCCTGCTG TAACCTGAGT GAAAGTTTCG ATACAAATCC CTCAGTAGAC
GTTTCTTACA ACGACGCGGT GACCGGCTCA AAACAAATAC AGCTGCTGGG ATTAAGCGGA
AACTATACCC AGCTGACAGT AGAAAACCTC CCCGGCCCAA GAGGGATTGC CACGCCGTTG
GGATTGAATT CCATAGCAGG TCCATGGATA GAATCTATCC AGCTGGTAAA GGGAATGGGC
TCGGTAGCAA ACGGTTACGA AAGTATCGCC GGACAAATAA ACGTCGAATT GAAAAAGCCG
GAAAATAGCG AACAAATGCT CGCGAACGTA TATGTAAACG ACTTCGGTAA AACAGACCTC
AATCTGAACC TGTCAAAGAA GATAAATGGC AAGTGGTCTA CCGGATTACT GATCCATGAT
GACTTCCTGA CGAACAAACA ATTGGATAAC AACAAAGACG GCTTCCGGGA CTTACCAACC
GGTAATCTCT TTAGTATCAT CAACAGATGG AAATATGATA ACGGAAAAGG ATTCCTCGCG
CAATTCGGTA TCAAAACATT AAAGGACGAT CGCACAGGTG GCCAGACGGC CTACAACCCA
TCCTCCGATA AATATACCAC CAAGTACTAC GGTATCGGTA TTAATACACA ACGATACGAA
GCCTTTGGTA AAGTCGGTTA TATTTTCCCT GCGCAGAAAT ATAAAAGTAT CGGACTACAG
CTATCGGCCA TCAGTCATAA ACAGGATTCC TATTTCGGAT TAACCACCTA CAATGCCACT
CAACGGAATA TCTATGGCAA CCTGATCTAT CAGTCTATCG TCAACAATAC CATGCATACC
TTTAGAACGG GCATCAGTTT CCTGTATGAT AAGTATGATG AACAATTCAA TGCCGCCTTC
TACAAGAGAA ACGAACTCGT CCCTGGTGCT TTTTTTGAAT ACACCTACAT GCCATCAGAA
AAGCTAAGCG TCGTTGCAGG TATACGCGCC GATCACAATA ACCTGTTTGG CGTATTTATT
ACCCCAAGAT TGAATGTTCG CTATGAACCA GTAAAAGGAA CCAACATTCG CCTGGCAGCG
GGTAGAGGAC AAAGAACAGC AAATATCTTT GCTGAGAATG CCAGCGTATT TGTCAGTGCC
AGGAGCGTGG AGATGTTATC AACAGAAAAG GGGAAAGCCT ACGGATTTAA CCCCGAAGTC
GCATGGAATA AAGGCATCAG CGTGGACCAG CATTTCAATT TATTTAGGAG AGACGCCTCC
GCAAGCATAG ATTTCTACCG GAACGATTTT ACCGACCAGG TAGTCGTTGA CCTGGAAGAT
CCACGGACTG TTAAATTCTA TAACTCAAAA GACAAGTCTT ATGCTAATAG TCTGCAGGTA
GGTCTGAAAC TGGAACCACT GGATAAATTC AACGTCTCAT TGGCATACCG TTATTTCGAT
GTGAAAACAA CTTACGATGG TAAGCTTTTA CAACGTCCGC TGATATCCAA ACAAAGAGCG
TTTGCCAATT TTGATTACGC ATTCAGCGGC TGGAAGTTTG ACTACACGTT TAACTATAAC
GGCAGTAAAC GCCTCCCTTC TACGGCAGCC AATCCCGAAA CAGACCGTCG GAATGCATAC
TCACCGGCAT ACATACTCAT GAATGCACAG GTAACGAAGG CTATTGGCAA AAAACGTCCG
ATGGATTTCT ATATCGGCGT GGAAAATATA GGAAATTATA TCCAGCAGGA TGCCATCATC
GCCGCTAACG ATCCCTTTGG CCGTTACTTT GACGCATCAC TGGTATGGGC GCCGATAACA
GGCAGAATGC TCTACGCTGG CTGGAGACTG AAAATTAAAT AA
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| Protein sequence | MTLYKYIILV VILLSDITTY AQTTGTKNTT ATFNVAGVCE QCKARIEDAA IGKGVLSAEW
DLGTKEIKVV YDSLKTSLEK IQKRIVAAGH DLQTAHAPDN VYNKLPACCH YRESEAMVHD
SKIETASKVQ LKEFSVTSKQ TSTYISALNT VRTETITSKE LLKAACCNLS ESFDTNPSVD
VSYNDAVTGS KQIQLLGLSG NYTQLTVENL PGPRGIATPL GLNSIAGPWI ESIQLVKGMG
SVANGYESIA GQINVELKKP ENSEQMLANV YVNDFGKTDL NLNLSKKING KWSTGLLIHD
DFLTNKQLDN NKDGFRDLPT GNLFSIINRW KYDNGKGFLA QFGIKTLKDD RTGGQTAYNP
SSDKYTTKYY GIGINTQRYE AFGKVGYIFP AQKYKSIGLQ LSAISHKQDS YFGLTTYNAT
QRNIYGNLIY QSIVNNTMHT FRTGISFLYD KYDEQFNAAF YKRNELVPGA FFEYTYMPSE
KLSVVAGIRA DHNNLFGVFI TPRLNVRYEP VKGTNIRLAA GRGQRTANIF AENASVFVSA
RSVEMLSTEK GKAYGFNPEV AWNKGISVDQ HFNLFRRDAS ASIDFYRNDF TDQVVVDLED
PRTVKFYNSK DKSYANSLQV GLKLEPLDKF NVSLAYRYFD VKTTYDGKLL QRPLISKQRA
FANFDYAFSG WKFDYTFNYN GSKRLPSTAA NPETDRRNAY SPAYILMNAQ VTKAIGKKRP
MDFYIGVENI GNYIQQDAII AANDPFGRYF DASLVWAPIT GRMLYAGWRL KIK
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