| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5681 |
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| Symbol | |
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| ID | 8361861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7246811 |
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| End bp | 7249171 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644967824 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_003125305 |
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| Protein GI | 256424652 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0807191 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTTA ACACTCCCAA AAGCATCCTG ATTGCTTTTT CAATTCTCCT GAGCGGCTTT
GCTTCGTTTG CACAAAATAG TGTCATACGT GGTGAAGTGA AGACCGCAGA TGGTAAGCCA
GCCGCCTTTG TAAACATTTT CCTTCAGCCC AGTGGTGCAC ACACAACTGT CGATCAGACG
GGCCACTATG AGATTAATAA TGTAAAACCA GGCAAACATA TCGTGGTAGC CAGTTTTACC
GGCCTGAAAA TACAACAGCA GGAGGCAGAT CTCCTGGCTG GTCAACCACT GATCATCAAC
TTCACCCTGC AGGAAGATAA CCGCACCTTA CAGGAAGTGA ATGTCACTTC AGGCTATAAT
AAGTTCGCCA GAAAGGAAAC GGAAAACGTA GCCCGTATGC CGCTCCTGAA TCTGGAAAAT
CCACAGGTAT ACCATGTTGT ACCAAAAGAA CTCCTGCAGG ATCAGGTGAT CATCAGCTAC
AATGATGTAC TGAAGAATGT AACCGGTGTC AGTCAGGCAT TGGTAAATGG TTCTAACTCC
TTTAACCTGC GTGGTTTCTT CACCACCAGC TACCTCCGCA ATGGTCTCCA GGATAATAAG
GCGAATAGCA TTGAAGTCAC TAATATCGAA CGTATAGAAG TACTGAAAGG ACCTTCTGCC
ACCTTGTTTG GTAGCTCCCT GGTATCCTTC GGTGGTTTAC TGAACCGCGT CACTAAAAAA
CCTTTCGAAA CTTTTAGTGG TGAAGTGACT TACACAACTG GCGGCTTTGG CCTGAACCGT
GTGAGCGCTG ACTTTAACAC GCCGCTGAAT AAGGAGAAAG GACTTCTCCT GCGTACCAAC
GTCGCTTATC ATGACGAACG TAGTTACCAG GACGCCGGTT TTACCAAACG TTTCTTTTTC
GCGCCCTCCT TACTATATAA AGTAAATGAC CGCCTGACGG TATTACTCGA CGCAGAGATC
TACACACAGA AAGCCAATGA TTTCAATCGC ATGTTTCCGG AAGCCTCTTT TGCGAAGACC
AATCCCCGCG ACCTGAACTT TGACTGGCTT CGCTCATATA GCAGCAATGA TCTGTATGAA
ACATCACCTT CCGTCAGCCT CTTTGGCGCT GTTAACTACC AGCTCTCTGA TCACTGGAAA
TCGCAGACCA GCTTTTCCCG TACAAGTGCA GACGTAGAAG GCTACTGGAG CTGGAACAGC
ATAGTGGGAG ACAGTTTAGT ATCGCGTAAT CCTGGCTATC AACAAACCAA TTATGATTAT
ACAGAAGTAC AACAGAACTT CAATGGAGAT TTCAGTATTG GTCGTCTGCG GAACAGAGTA
GTGATCGGCC TTGACTATTT TACAAATACG ACAACCAGTT CATCTGCCAG CATATATGGT
TTTGATGAAG TCTATATCCA TCAGGCAGAT CCACGTTACA ACGAACTGAC AGTACCCGCG
CTGCAACAGG CATTCTCTGC CATCCCTTAT GCTAAAAGCC GGAGCAAACA AAGCGCATAT
AGCGCCTATT TCTCCGACGT ACTGAATATC ACAGATAACC TATTGGTAAT GGCCAGTCTG
CGTGTTGACC ACTTTGTGAA TGGAGGTACT TATAATATCA ACCTTGATAC GACCACCGGC
AAATACAACC AGACGACCCT GTCGCCTAAA CTGGGGTTAG TATACCAGCT GATCCCTAAA
CAGCTGGCCG TATTCGGTAA CTACATGAAC GGCTTCAGTA ATAATGCCCC TGTAAGGCAA
CCTGACGGCA CCTTTACATC CTTTAAACCA AGTCGCGCGA ATCAGTGGGA GGGAGGTGTA
AAACTGGAAC TCTTTAACGG AAAAGTAAAC AGTACCCTGA GCTATTATCA TATCAAAGTG
GATGACATGA TCCATAATAG TTTTGATCCG GAAAAAGCAG GCTTCCAGGT ACAGGACGGC
GGACAATTAA GCAAAGGTTT TGAAGCTGAA GTGATCGCGA ATCCGATACA AGGACTGAAT
ATTATTGCCG GATATGCTTA TAACGATATT TATACTATAA ATACCGATCC TGATGCAGAT
GGTCTGCATC AATGGACTGG TCCTGCTCAT ATGGCGAATC TCTGGCTGAG CTACCACCTG
TTCAATACCG CCCTGAAAGG TCTGGGTATT GGTGTTGGCG GTAACTACAA CGGGAAAGCC
TACATACAGC AATCCCGTTC ACAGGGAGAG TTTTATCTGC CTTCTTATAA AGTACTGAAT
GCCGTATTGA GTTATGAACA TTCAGTATAC CGGATCAGTT GTAAACTGGA CAACCTGACC
AATGAAGTAT ATTGGGGTAG TTATGTCAGC AGAATGATGC CACGCAGATT CAGCGCAACA
GTAACATTTA AATTCAGATA G
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| Protein sequence | MNLNTPKSIL IAFSILLSGF ASFAQNSVIR GEVKTADGKP AAFVNIFLQP SGAHTTVDQT
GHYEINNVKP GKHIVVASFT GLKIQQQEAD LLAGQPLIIN FTLQEDNRTL QEVNVTSGYN
KFARKETENV ARMPLLNLEN PQVYHVVPKE LLQDQVIISY NDVLKNVTGV SQALVNGSNS
FNLRGFFTTS YLRNGLQDNK ANSIEVTNIE RIEVLKGPSA TLFGSSLVSF GGLLNRVTKK
PFETFSGEVT YTTGGFGLNR VSADFNTPLN KEKGLLLRTN VAYHDERSYQ DAGFTKRFFF
APSLLYKVND RLTVLLDAEI YTQKANDFNR MFPEASFAKT NPRDLNFDWL RSYSSNDLYE
TSPSVSLFGA VNYQLSDHWK SQTSFSRTSA DVEGYWSWNS IVGDSLVSRN PGYQQTNYDY
TEVQQNFNGD FSIGRLRNRV VIGLDYFTNT TTSSSASIYG FDEVYIHQAD PRYNELTVPA
LQQAFSAIPY AKSRSKQSAY SAYFSDVLNI TDNLLVMASL RVDHFVNGGT YNINLDTTTG
KYNQTTLSPK LGLVYQLIPK QLAVFGNYMN GFSNNAPVRQ PDGTFTSFKP SRANQWEGGV
KLELFNGKVN STLSYYHIKV DDMIHNSFDP EKAGFQVQDG GQLSKGFEAE VIANPIQGLN
IIAGYAYNDI YTINTDPDAD GLHQWTGPAH MANLWLSYHL FNTALKGLGI GVGGNYNGKA
YIQQSRSQGE FYLPSYKVLN AVLSYEHSVY RISCKLDNLT NEVYWGSYVS RMMPRRFSAT
VTFKFR
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