| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5679 |
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| Symbol | |
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| ID | 8361859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7243177 |
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| End bp | 7244712 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644967822 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_003125303 |
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| Protein GI | 256424650 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.132353 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAGAA CTTTACTATT GCTCACACTA TTACTATGTC TCACTGTTAA TGCCAGCGCT
ACACACAAAC CCGTTCGTTG GTCGGTACAA GCCTGTTCGC TTATCGTCAA CTGTGGAAAA
AATGCCCTGC TGACGGCCAG GGTGACTGCT CCGGAACCAC GGTACACGAT CAGCTGGAGT
ACCGGACAGC GGTCGCCGGT TATACAGGTA GGGCGTAACG GCCGGTATAT CGTTACCTTA
AAAGATCATC AAGGCATTAT ACGTGCCAGG GACACGATCA ATTTATTACT GAAAAAACCG
TTCGAAGCGA GTATCAGACT GCATTCCGGT GCTACCGTTG ATACGCTGGT TGCTTATCCT
CAGAATGGTC GTCTCACCAG GTATACATAT CAATGGTACA GGAATGATAC GCTGGTTAAA
AAGGGATCTT CTCCACGTTA TGTAGCACCG CTTGCCGGCA TGTATAAAGT CGCGGTAACG
GGCATTACTG GTTGCAGGGA TGTCTCGGAT ACCCTGACTT ACCGGGTGTC TGCACCACTC
TCTGTAGATT ACACGTATAA AACGGCATCC TGCAGTGAGC AGGAATTAGC ATTTACGCCG
GTTGTTACTA CGACGGATAG TATTGTCAGT TACCTGTGGA ATTTTGGTGA TCAGAGCCAG
GTTTCGATAC CTAATCCTGT ACATGGATTC GCCCCGGGTA GTTATACTGT TTCCCTGACG
GTGACTTCCC TCGCCGGACA GACGGGGACT GTCAGTAAAG AGATTGTGAT ACCACCAGTG
ACACCGTGGG AAGTTAGTAT CCTTCAGCAT CCGAATGCCT GTGGAGATGC TGTAGAACTA
CAGGTGGTCA CCTCACCGCA AGCCCGATAC TTTGAGTGGA ATGGTTTGCC TGACCGGGAT
CGTATTACGG TTACCAGATC CGGCAGATAT GTGGTGCAGG TATATGATAG TTGTACAGTA
TTAAGAGGTA CGGCGACGGT CGATGTTACT GTGCAGACAG CTTTTGTTGC CGAGATACGC
ATTATTCCCG GGGTAAATAG TGGTGATACA CTGGTTGCGG CAGTTGCAGG GGGTGCAGCT
TTCCCGACGG GTATCCCTCC AGCGGGGTAT TACTTTACCT GGTACCTGAA TGGAACGCCG
ATCGGAGGAC CAGAGCCCTG GATCACCGAC CTGGTATCCG GGCAGTATAC CGTGTTGATT
GAAACCCAGA GCGGTTGTTC TTCTTTGTCT GCGCCGTTTG GTTATATTTC CGGTACTGCG
TTGCGGTTAA AGGCTGGTAA TATTCCGTCA GCAGATAGCG GTAAGGTCAG TGCGTTCCCG
AATCCTTCAT TAGGGCAGTT TAATCTACGG TTTGATAAAC CTTTGGAGAA GAGGGTTATC
ATACAGGTGT ATGATATGCA GGGACGGGTT ATGTATACGC GGACGACGCA GCAACAGCAG
CAGTTGATTG ATATTTCAGG GTTGCCGAAA GGGCAGTATT TTATAAATAT AATTGGGGAT
GGTGAGCGGA AGACGCTAAC GCTGTTATTG CAGTGA
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| Protein sequence | MMRTLLLLTL LLCLTVNASA THKPVRWSVQ ACSLIVNCGK NALLTARVTA PEPRYTISWS
TGQRSPVIQV GRNGRYIVTL KDHQGIIRAR DTINLLLKKP FEASIRLHSG ATVDTLVAYP
QNGRLTRYTY QWYRNDTLVK KGSSPRYVAP LAGMYKVAVT GITGCRDVSD TLTYRVSAPL
SVDYTYKTAS CSEQELAFTP VVTTTDSIVS YLWNFGDQSQ VSIPNPVHGF APGSYTVSLT
VTSLAGQTGT VSKEIVIPPV TPWEVSILQH PNACGDAVEL QVVTSPQARY FEWNGLPDRD
RITVTRSGRY VVQVYDSCTV LRGTATVDVT VQTAFVAEIR IIPGVNSGDT LVAAVAGGAA
FPTGIPPAGY YFTWYLNGTP IGGPEPWITD LVSGQYTVLI ETQSGCSSLS APFGYISGTA
LRLKAGNIPS ADSGKVSAFP NPSLGQFNLR FDKPLEKRVI IQVYDMQGRV MYTRTTQQQQ
QLIDISGLPK GQYFINIIGD GERKTLTLLL Q
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