| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5668 |
|---|
| Symbol | |
|---|
| ID | 8361848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 7229149 |
|---|
| End bp | 7229508 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644967811 |
|---|
| Product | transcriptional regulator, HxlR family |
|---|
| Protein accession | YP_003125292 |
|---|
| Protein GI | 256424639 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.433337 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGAGC GAAAAATTCC TTTAGACCTG AATTGTGGGA TGGCTGTCAT TATGGAGATC
ATTGGCGGCA AATGGAAACC TTGTCTGATC TTTAACATAT CCAGGGGGAT CAGAAGACCC
GGAGAACTGC AACGGTATAA TCCTGCTGCT ACCCGGCGGG TGCTTACGCA ACAGTTGAAG
GAACTGGAAG AGCATGGGAT CATCAGGCGT GTCGTATATG CCGAAGTACC ACCCAAAGTG
GAATACTATC TTACAGAGAA GGGTGAATCC CTGATGCCTG TCATCAATGC GATGGAGAAC
TGGGGCGCCG GCCATCTGCC GGAAACACTA TTGGAACAAG TAGTAGCCCT TCCCCAATAA
|
|---|
| Protein sequence | MYERKIPLDL NCGMAVIMEI IGGKWKPCLI FNISRGIRRP GELQRYNPAA TRRVLTQQLK
ELEEHGIIRR VVYAEVPPKV EYYLTEKGES LMPVINAMEN WGAGHLPETL LEQVVALPQ
|
|---|
| |