Gene Cpin_5652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5652 
Symbol 
ID8361829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7209082 
End bp7209855 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content45% 
IMG OID644967793 
Producthypothetical protein 
Protein accessionYP_003125277 
Protein GI256424624 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.372875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAG ATCACGCGCA ACATGACCGG GAAGCAGAAG AGAAAATCCT GCACGACGTA 
GAAAAGTATG GTTGTCACAT CGCCATGCTG GAAGCGGAAG ACCACCTGCC TTCCTTCGCC
TATACCATAG GCTTGTATAA GACTTTCGGA CAACCGGAGA TCATCTGTTT TGGCCTGCCG
GTAAAAACGA TGGCAGGGCT ACTCAATGAT GCAGCAGATA TTATCAGGGA AGGCGGTTCA
TTCGTTACTG GCAAATTGTA TGCAACATTC CTGGTTGATT ATTACATTCA GTTCCTGGAA
GTCAACAAAG CCAGTTATCG TGATTATGTA GGTTATGCGG GTTGGTTCAA TGGTAATTTT
GATTTTCCCT TGTTACAGTT TGTATGGCCC GACAAGCAAC ATCATTTTCC CTGGGAAGAA
AGCTTCAATC CAGACTGGCA ATTCCTGCAA CCCTTACTGG ACAGGAACAT GGATTTTAAA
TTTCCTGAAA AGAAAAACCT GGCCGTATTT GTAATGAAAC AGGCATTTGA AGGAATGCCG
GTACTAAAAA TCTATCATGG CCATGACGGA GACTGGGAAT TTCATACACA CGATGATTAC
CAGATAGAAG ATGTCATACT GGTAGCGTTG GAAAGGATGA CCAAACTGGA CCCGAGTATC
AATCGTGTCT TTGGTCTTCC GAGAGGGTAC AAAGCATGGC GGGAAAGCAG GGAAGATGAT
TGGGAATATG CGCCGTATGA GGCTTCAGAA GATGACGAGG AAGAGGATAT ATAG
 
Protein sequence
MTTDHAQHDR EAEEKILHDV EKYGCHIAML EAEDHLPSFA YTIGLYKTFG QPEIICFGLP 
VKTMAGLLND AADIIREGGS FVTGKLYATF LVDYYIQFLE VNKASYRDYV GYAGWFNGNF
DFPLLQFVWP DKQHHFPWEE SFNPDWQFLQ PLLDRNMDFK FPEKKNLAVF VMKQAFEGMP
VLKIYHGHDG DWEFHTHDDY QIEDVILVAL ERMTKLDPSI NRVFGLPRGY KAWRESREDD
WEYAPYEASE DDEEEDI