Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5652 |
Symbol | |
ID | 8361829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7209082 |
End bp | 7209855 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644967793 |
Product | hypothetical protein |
Protein accession | YP_003125277 |
Protein GI | 256424624 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.372875 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACAG ATCACGCGCA ACATGACCGG GAAGCAGAAG AGAAAATCCT GCACGACGTA GAAAAGTATG GTTGTCACAT CGCCATGCTG GAAGCGGAAG ACCACCTGCC TTCCTTCGCC TATACCATAG GCTTGTATAA GACTTTCGGA CAACCGGAGA TCATCTGTTT TGGCCTGCCG GTAAAAACGA TGGCAGGGCT ACTCAATGAT GCAGCAGATA TTATCAGGGA AGGCGGTTCA TTCGTTACTG GCAAATTGTA TGCAACATTC CTGGTTGATT ATTACATTCA GTTCCTGGAA GTCAACAAAG CCAGTTATCG TGATTATGTA GGTTATGCGG GTTGGTTCAA TGGTAATTTT GATTTTCCCT TGTTACAGTT TGTATGGCCC GACAAGCAAC ATCATTTTCC CTGGGAAGAA AGCTTCAATC CAGACTGGCA ATTCCTGCAA CCCTTACTGG ACAGGAACAT GGATTTTAAA TTTCCTGAAA AGAAAAACCT GGCCGTATTT GTAATGAAAC AGGCATTTGA AGGAATGCCG GTACTAAAAA TCTATCATGG CCATGACGGA GACTGGGAAT TTCATACACA CGATGATTAC CAGATAGAAG ATGTCATACT GGTAGCGTTG GAAAGGATGA CCAAACTGGA CCCGAGTATC AATCGTGTCT TTGGTCTTCC GAGAGGGTAC AAAGCATGGC GGGAAAGCAG GGAAGATGAT TGGGAATATG CGCCGTATGA GGCTTCAGAA GATGACGAGG AAGAGGATAT ATAG
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Protein sequence | MTTDHAQHDR EAEEKILHDV EKYGCHIAML EAEDHLPSFA YTIGLYKTFG QPEIICFGLP VKTMAGLLND AADIIREGGS FVTGKLYATF LVDYYIQFLE VNKASYRDYV GYAGWFNGNF DFPLLQFVWP DKQHHFPWEE SFNPDWQFLQ PLLDRNMDFK FPEKKNLAVF VMKQAFEGMP VLKIYHGHDG DWEFHTHDDY QIEDVILVAL ERMTKLDPSI NRVFGLPRGY KAWRESREDD WEYAPYEASE DDEEEDI
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