| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5629 |
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| Symbol | |
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| ID | 8361806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7178121 |
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| End bp | 7178717 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967770 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_003125254 |
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| Protein GI | 256424601 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.973642 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA TCCTCATCGG CGCATCCGGC ACGATCGGCA AACACATCGC TGCTTCACTG
GAAAAAGAAC ATGAAATCAT CAGAGTAGGA TCAAAAAGCG GCGTAATACA GGCAGATATC
ACCTCCCCGG CATCAATAGA GCATCTGTTC AAACAGACAG GTCCTTTTGA TGCACTGGTA
AGTACGGCAG GAGATGCGCA TTTCGGTCCG CTGAAAACAA TGAACGATAA AGAGTTCAGA
ATAGGCGTCA ACAGTAAGTT AATGGGGCAG GTCAACCTGG TACTGATCGG GCAGCATTAC
ATCAAACCGA AGGGATCTTT TACGCTGATA TCCGGCGTCC TTTCACAAGA CCCTGTATTG
AGCGGTGGAA ACCCTGCGGC CATGAACGGC GCCATAGAAT CCTTTGTACG TGCAGCCGCC
ATAGAACTGG AAAATGGAGT TAGAATCAAT GCCGTGAGTC CGACGGTTGT GGAAGAGTCT
CCCGAATATT TTCCATATTT CCCGGGACAT ATACCGGTGA CTATGAAAGA AGTGATAGCC
GCTTATCATA AGAGTATACT GGGCGCAGGC ACCGGACAGG TGATCAAAGC TTATTAA
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| Protein sequence | MKIILIGASG TIGKHIAASL EKEHEIIRVG SKSGVIQADI TSPASIEHLF KQTGPFDALV
STAGDAHFGP LKTMNDKEFR IGVNSKLMGQ VNLVLIGQHY IKPKGSFTLI SGVLSQDPVL
SGGNPAAMNG AIESFVRAAA IELENGVRIN AVSPTVVEES PEYFPYFPGH IPVTMKEVIA
AYHKSILGAG TGQVIKAY
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