Gene Cpin_5618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5618 
Symbol 
ID8361795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7169193 
End bp7169669 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content39% 
IMG OID644967761 
Productfatty acid hydroxylase 
Protein accessionYP_003125245 
Protein GI256424592 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATTAC TATCTTATAT ACTGGCGGGG CTTGGTGCAT TTGTTTTTAT GGAAATGGTA 
GCGTGGTTCA CGCATAAATA TATTATGCAT GGATTTTTGT GGTCTTTGCA TAAAGATCAT
CATCGTAAAG AAGAGGGACA GTTCTTTGAG AAGAATGATT TCTTCTTTGT GATATTTGCC
TTACCCGGAA TGCTGTTGTT TCTGTTTGGT ACATTACAGC ATTTACCATA TCTGATCGCG
ATCGCCACCG GCATCACTTT ATATGGCGCT ACCTATTTTC TGGTGCATGA CGTTTTTGTA
CATCAGCGTT TCCGTTGGTT GAGACAATCA GATAATATTT ATCTGCGTGC GCTGAGACGT
GCGCATAAGA TGCATCATAA ACATTTAGGT AAAGAAAAAG GAGAGTGTTT CGGGATGTTG
TTTTTCCCGG TACGTTTTCT GAGAGATGCT TTCAATAAAG AAAAAAGTTA TTCCTGA
 
Protein sequence
MLLLSYILAG LGAFVFMEMV AWFTHKYIMH GFLWSLHKDH HRKEEGQFFE KNDFFFVIFA 
LPGMLLFLFG TLQHLPYLIA IATGITLYGA TYFLVHDVFV HQRFRWLRQS DNIYLRALRR
AHKMHHKHLG KEKGECFGML FFPVRFLRDA FNKEKSYS