| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5606 |
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| Symbol | |
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| ID | 8361783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7157050 |
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| End bp | 7157889 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967749 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003125233 |
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| Protein GI | 256424580 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0545512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.986843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTA CGAGGTTCTT ATTACGCGAC TTCATTACAA AAGGTGAACT TTTTCATCTG
GCCAGGGTAA AAATATTCTC TACCGATGAT ATTTCACTTC ACAATCATGA TTATGCCGAA
ATCTTCTGGA TAGAGCATGG CAATGGCACT CATCTGATCA ATGGACTAAA CACCCCGCTG
AATACAGGCG ATATTATCAT GATGCGCCCG GATGATCTGC ATACCTTCTC TTCCAACCGT
CAGGGCATTA CCATGATGAA CCTCGCATTT CCCTTTAAAA CCGTACAGTA TTTCAAAAAG
CGATACTTCC CGGAATCGGA AGATTTCTTC TGGAAAAAAG GCGACCTGCC CTACCAGGCC
ACACTGGACG AAACGATCTT AAGAAGCATC ACCCACCTGG CAGAAAAAAT GTGGAAACAC
CAGGACTCCG CCATCTACCT GGACAGTTTC CTACTCTCCC TTTTTAAACT CCTGCTCCCT
ACTGAAAATC AACCGGATAA CCAGGACATT CCCGCATGGC TGAACAATGC CATCCAGCTA
TTTCCTGCAC AACCCGATCT CTTCCGCCTG GGCGCCAGAG GTTTTGCCTC CATCTGCGGC
CGTAACATCG ATTATGTCAA CCGTACCGTC CGCAAATGTT ATGACAAAAC ACTCTCTACC
CTGGTGACGG AATTACGTAT GCAGTTTGCA GCCAGACAGT TAGCCATCAC GAATGCCCCC
ATTAAGAGCA TCTGCCACGA TTGTGGCTTC AATAACCTCG GCCATTTCTA CAAACAGTTT
CAGACTATTT ACCAGCAAAC ACCTTCTCAA TACAGGGAAC AGCACCAACG TATGTCGTAG
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| Protein sequence | MKITRFLLRD FITKGELFHL ARVKIFSTDD ISLHNHDYAE IFWIEHGNGT HLINGLNTPL
NTGDIIMMRP DDLHTFSSNR QGITMMNLAF PFKTVQYFKK RYFPESEDFF WKKGDLPYQA
TLDETILRSI THLAEKMWKH QDSAIYLDSF LLSLFKLLLP TENQPDNQDI PAWLNNAIQL
FPAQPDLFRL GARGFASICG RNIDYVNRTV RKCYDKTLST LVTELRMQFA ARQLAITNAP
IKSICHDCGF NNLGHFYKQF QTIYQQTPSQ YREQHQRMS
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