Gene Cpin_5603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5603 
Symbol 
ID8361780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7153194 
End bp7154288 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content51% 
IMG OID644967746 
Productglycosyltransferase 
Protein accessionYP_003125230 
Protein GI256424577 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.183412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.950929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCGC ATTTACAGAC AGCAGAAACA TTTCCCGAAA AAGCTTTTGT GCCGGATGAG 
CTGGTATTAC CAGCGTTCAA TCCGGCACAT CTGCTGAACA TGACAGACAG CACCGGCATG
ATACAACATG CACTGCGCAT TACGCCCAAC AGGAAAGAAG GCTATTGTAC GGACGATAAC
GCCCGCGCTT TAATGCTGAC GGTCCTTGCC TGGAAACAGG GCCGGTATCC CGAGGTACTC
AGACTCATGT CCATCTACCT GAGTTTCATC CACTATATGC AGATGGAGGA CGGTTACTTC
CATAACTTCC TGCGTTATGA TAAACAGATC GTTTACGATG GCAGTTCGGA AGACGCCTAT
GGCCGTACAC TGATGACCCT TGGATACCTG GTAGAATACG GCCCTTCTCC GCTGATGATC
AGAACAGCCG AAGACCTGTT CCTGAAAGCG GCCGCACATA TGGACAAGCT GCAATCCCTG
CGGGGCATGG CGAATAGTCT CGTTGGCCTC TGCCTCTTCG TCCGCTCACA TACCGGCGAC
CAGGAACAGC TATCCAGAAT AAGCCTGCTT GCGGATCAGC TTATCGATGA ATACAACAGA
TACAGTGATG ATAAATGGTG CTGGTTTGAA GAAGTACTGA CCTATGATAA CGGCATTCTC
CCATTGGGAC TATTACATGC TTACAGCATC ACCCGTCAGG AAAATTACCT GCATACCGCC
CTGGAAGCGA TCAGTTTCCT GGAGTCGAAG GTCTTCCATG ATGAGGTGCT TTATCCCGTA
GGCAATAACG GCTGGGCAAG CAAAGGTGGC AGTACCGCCC TGTTCGACCA GCAACCACTG
GACGCCATGG CCATGGTCCT GTGCTATCAG CAGGCGTTTC ATGTCACCGG CGATACGAGA
CACCTTCATA GACTGACACA ATCCTGGCAA TGGTTTATGG GCGCTAATGC CCTTCAGCAA
CCTTTGTACG ACGACATCAC CGGTGGTTGT GCAGATGGTC TGCAACCCGA CCGTGTCAAT
GAAAACCAGG GTGCAGAAAG TACTATCGCT TTCTGGATCT CCTACTTTGC TGTTGCCGAA
ACATTAAATA AATAA
 
Protein sequence
MRSHLQTAET FPEKAFVPDE LVLPAFNPAH LLNMTDSTGM IQHALRITPN RKEGYCTDDN 
ARALMLTVLA WKQGRYPEVL RLMSIYLSFI HYMQMEDGYF HNFLRYDKQI VYDGSSEDAY
GRTLMTLGYL VEYGPSPLMI RTAEDLFLKA AAHMDKLQSL RGMANSLVGL CLFVRSHTGD
QEQLSRISLL ADQLIDEYNR YSDDKWCWFE EVLTYDNGIL PLGLLHAYSI TRQENYLHTA
LEAISFLESK VFHDEVLYPV GNNGWASKGG STALFDQQPL DAMAMVLCYQ QAFHVTGDTR
HLHRLTQSWQ WFMGANALQQ PLYDDITGGC ADGLQPDRVN ENQGAESTIA FWISYFAVAE
TLNK