| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5595 |
|---|
| Symbol | |
|---|
| ID | 8361772 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 7144982 |
|---|
| End bp | 7145389 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644967739 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_003125223 |
|---|
| Protein GI | 256424570 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000316112 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAG TAAAGAATGT TTGCATTGTC GATGATGATG AATTATTCCA GTTTGTAATG
CGGCAGCACT TTGAGCGGCT GGATCTTGTA GAACGCGTTC ATAAGTTTAC AGACGGCGAA
CAGGCGCTTC ATCACATCAA GTCTCACCTT GACAATCCGG ATGAACTGCC GGACCTGATC
CTCCTGGACG TTAACATGCC TTATATGGAT GGCTGGCAGT TTATGACCGA ATTCGTACGA
CTACAACTAC CTACGGAAAA ACATATCCGG GTATATATCC TTACCAGTTC AACACATGAA
AGTGATCTGC AGAAAGCCAG GGAGTTCCCA ACCTTATCCG GTTACCTGGT GAAACCTATC
GGAAAGAATA TGATCCGCGA AATCCTTGTC GGCGCAGAAC AACACTAA
|
|---|
| Protein sequence | MSKVKNVCIV DDDELFQFVM RQHFERLDLV ERVHKFTDGE QALHHIKSHL DNPDELPDLI
LLDVNMPYMD GWQFMTEFVR LQLPTEKHIR VYILTSSTHE SDLQKAREFP TLSGYLVKPI
GKNMIREILV GAEQH
|
|---|
| |