| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5571 |
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| Symbol | |
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| ID | 8361748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7112761 |
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| End bp | 7114008 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644967715 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_003125199 |
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| Protein GI | 256424546 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000397488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.22054 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGTAC TCATTATCGG CGGAGGAATT ATAGGTCTGA GCAGTGCCTT TTATCTGCAA
CAGGCAGGAT ATGCAGTGAC TGTGATCGAC AGAACGGATA TGCAGCAGGG ATGTTCCTAT
GGCAATGCGG GATACATCTG TCCCAGTCAT TTTGTGCCAC TGGCGACGCC TGGTATTGTC
AGACAAGGCT TAAAATGGAT GCTCAACGCT AAAAGCCCCT TTTATATCCG GCCCAGTCTG
AGTCCGGATA TGATCAGCTG GGGGTGGCAG TTCATGAAAA GTGCGACTCG TGCACATGTG
GAGCGATCTG CGGTACCGTT GAGGGATATT GCACTATTGA GCAAAAGGCT GTATGAGGAG
TGGACACAGA CACCCGGACT GGACTTTTCC TATGACCCGC AAGGGATGCT GGAATTATTC
AATACGGAGG AGAACGCACA TCATGCGGAG GAGACGATAA AAGAGGCCAA ATCGCTGGGA
TTGGACGCCC GGCTGATAGA TAAGGCCACT CTACAAAATA TGGAGCCGGA TACGGCTATA
AATGCCTTAG GAGCGGTTTA TTTCCCTGGT GATGCACAAC TGTATCCGAA TCAGCTGATG
AATAGTCTGA AAGACTGGTT ACGGACACAT GGTGTACAGT TCAGGGGCAA TGAGGAAGTA
ACAGGGTTTA TTACGGATGG GAATAAGGTA AAGGGCGTCA AAACAAAGAC TGCCGTCTAC
GCGGCTGATC ATATTGTAGT GGCGGCAGGT GTATGGAGCC GTGACCTGGC CAGGGAATTA
CAATTGAAGA TCCCGATGGT GGGAGGCCGG GGCTACTCTG TTACCTTTGA AAATGGGCCC
TATAAGGTAA GACATTCGGT TATTCTCAGT GAAGCCAGGG TGGCAATTTC TCCGATGAAC
GGGAATAAGA TCCGCTTTGG CGGTACGATG GAAATTACCG GACTCAATGC CCCTCCGCGT
ATGCAGCGGG TACAGGGCAT CCTGGAGTCT GTAAAAAGAT ATTTTCCGGC TTATGATATC
CCTTTACCGG CAGCGGAGGA TGTCTGGTAT GGATACCGTC CGTGCAGCGC AGATGGACTG
CCGCATATCG GAACACTGGA ACGTTATCCG AATGTGACAG TAGCTACGGG GCATTCCATG
CTGGGGATCA GTCTGGGAGC AGCGACGGGT AAGCTGGTCG GCGAACTGGT GACCCGGGCG
CCATTATCCA TGGATATCTC ACCTTTTAAA GTTGAAAGAT TCAGTTAA
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| Protein sequence | MEVLIIGGGI IGLSSAFYLQ QAGYAVTVID RTDMQQGCSY GNAGYICPSH FVPLATPGIV
RQGLKWMLNA KSPFYIRPSL SPDMISWGWQ FMKSATRAHV ERSAVPLRDI ALLSKRLYEE
WTQTPGLDFS YDPQGMLELF NTEENAHHAE ETIKEAKSLG LDARLIDKAT LQNMEPDTAI
NALGAVYFPG DAQLYPNQLM NSLKDWLRTH GVQFRGNEEV TGFITDGNKV KGVKTKTAVY
AADHIVVAAG VWSRDLAREL QLKIPMVGGR GYSVTFENGP YKVRHSVILS EARVAISPMN
GNKIRFGGTM EITGLNAPPR MQRVQGILES VKRYFPAYDI PLPAAEDVWY GYRPCSADGL
PHIGTLERYP NVTVATGHSM LGISLGAATG KLVGELVTRA PLSMDISPFK VERFS
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