Gene Cpin_5569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5569 
Symbol 
ID8361746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7110368 
End bp7110973 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content44% 
IMG OID644967713 
Producthypothetical protein 
Protein accessionYP_003125197 
Protein GI256424544 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.021029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.152515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG GATTATTACT GGCAGGGATC CTTGCAGTAA TTACAGGAAC GGCAGCTACT 
GCACAACGTG TAAATTACGG GTTAAAGGCC ACGTTAATGT TCTCTAACGT TAAGGGTGAG
GGCATTAATC CGAACTATAA ACCAGGATTT CAGGGAGGAG CTTTCTTCGA ATTCGACCTG
TCAAAGGACA AAAAATGGGG TATCCAGCCG GAATTGCTTT TTACACAGAC TTCAGCTAAA
AAAGGAAATG ACTTTGCCCA GAAATATGTG ACCTATCACA ATACACAAGG CAGAGACAAG
ATCAAGATCA GTGCAGTAAG TATTCCATTA ATGGTACGCT ACTCACCGAT CCAGGCGCTG
ACCTTTAATC TCGGTGCACA GTACACTTAC ATGTACTTCA TCGATGAAAA TCTGCTGAAA
GCTAACAGAG ACGCCTTTAA GAAGAGCGAT ATCGGTGCTG TTGCCGGTGC CCAGATCAAT
GTTGGTAATG TTCGTTTCAT TGGCCGCTAC GTGCTGGGCC TGACCAACAT CAACAATATT
CCGGCGCCTC AGTACGATTG GAAGACACAT CAGATTACAC TGGGAATAGG CGTTGCTTTT
AAATAA
 
Protein sequence
MKKGLLLAGI LAVITGTAAT AQRVNYGLKA TLMFSNVKGE GINPNYKPGF QGGAFFEFDL 
SKDKKWGIQP ELLFTQTSAK KGNDFAQKYV TYHNTQGRDK IKISAVSIPL MVRYSPIQAL
TFNLGAQYTY MYFIDENLLK ANRDAFKKSD IGAVAGAQIN VGNVRFIGRY VLGLTNINNI
PAPQYDWKTH QITLGIGVAF K