Gene Cpin_5558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5558 
Symbol 
ID8361735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7095331 
End bp7095759 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content40% 
IMG OID644967702 
Producthypothetical protein 
Protein accessionYP_003125186 
Protein GI256424533 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0546206 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAGAA AATTGTTATC AGACATTCTA TCTGCTCTAC TGGTATTCCT TTTTATTTAT 
ACCGGTATGA GTAAATTGCT CGACTATCAT ACATTCCGGC GGCAATTGGG ACAATCGCCT
TTTATCACTT TGTACGCGCC TGTTATCGTC TGGGCACTAC CATTGGGGGA AATAATTATT
GCGGGACTAC TACTCTATAC CCGCACACGT TTAATGGGGT TTTATCTTTC TTTTTTTCTT
TTAAGCCTTT TTACATTTTA TCTGGTAGCT ATGCTGCGGC TTAGTTATTT TATTCCTTGT
TCCTGCGGAG GTGTTTTACA ACATCTTTCA TGGAACGCAC ACATTGTTTT TAATATCGTC
TTTGTCATAC TATCAACTAT CGGGGTACTG CTGCACGCAA AACAACAAAG TGCACAACCA
GCCAACTGA
 
Protein sequence
MSRKLLSDIL SALLVFLFIY TGMSKLLDYH TFRRQLGQSP FITLYAPVIV WALPLGEIII 
AGLLLYTRTR LMGFYLSFFL LSLFTFYLVA MLRLSYFIPC SCGGVLQHLS WNAHIVFNIV
FVILSTIGVL LHAKQQSAQP AN