| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5553 |
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| Symbol | |
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| ID | 8361730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7089098 |
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| End bp | 7091227 |
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| Gene Length | 2130 bp |
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| Protein Length | 709 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644967697 |
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| Product | Chitinase |
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| Protein accession | YP_003125181 |
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| Protein GI | 256424528 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.122706 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATAA ACGCAGCAGG ATTCCGCCCC GGGAATGCCG GCTGCTATCC TATAGGAGGT
TTTTTTATTA TATTTGCCCC GACTCAAAAT AATCATCGTA CCGCCGGGTA CACAACCCAC
TATGCTATGA AAACTGCACG TTTCATTGTC TTCCTATTGC TATGCTGTAT GTCCACAGCT
TTCTCCCAAT CGATTACTGA TGTTATCACC AGTGCTGAAT GGGATGTTTT ATTTCCACAT
CGTTTTAATC CTGATGACCG TACCGGTAGT GGTACTTTAC CCACTACAGC CGCGAAGGAT
TTCTATTCTT ACGCCAATTT CAGAGAAGCC GTAAGACTGA TGTCCAACAT CAAGATTATT
TCTGAAAGAC GTTGTGCGAC CAATGCCTAC AAACTGACCC GTGTGGACAA AACCACCGGC
GCTTCAGTGG TAATCCGTCA GGATGCGGAT TTCAGCGTTT CTCCTAACGC TATTATCCGC
GAGGAGATCG ATTATGCCAC CTTTGCGGGC GAGGGCGACC TGATTGTCCG TAAAAGGGAG
CTGATGGCAT TCCTCGCCAA TATCTCCCAG GAAACCACCG GTGGCTGGCC TACGGCACCT
GGCGGTCAGT ATGCCTGGGG ATTGTATTTC CGCGAAGAAG TAGGTTATGA AGGTACCAGC
AACATCGGTT ACCGCGAAGC CAGCACACAG TATCCGCCTG CTGCGGGTAA ATCCTACCAT
GGCCGTGGTC CGATCCAGTT AAGCTGGAAC TATAACTACG GTCAGGCAAG TGAATTTATC
TTCGGTGACA AGAACGTATT ACTCGCTAAT CCGGAGAAAG TGATCCAGGA TGGCGTGATT
GCTTTCCAGA CAGGTATCTG GTTCTGGATG GCCCAGCAGT ATCCCAAACA GTCCTGCCAT
GATGTAATGA TCCCTGGTAA ATGGGAACCT ACTGCTGCAC AGATAGCCGG TGGCCTGAAA
CCCGGTTTTG GCGCTACGGT GAATATCATT AACGGCGGAC TGGAATGTAA CAAGGGAACA
GAGAACACGA AAGTACTCAG CCGTATTGCG CATTATCAGC GTTATACCGG TATCAAACAG
GTAAGCATGG AGCTGAATGG CGGTAATAAT GCGGTTAACT GTGGTTGCGC GAATATGGCT
CCTTTTGCCA TCGACAACAC GGAGTGTTCA CAGATCACGG CATTGACCTT CACTTCTCCT
GCGAATGGTA TTCTCAGTGT GACTTCCCTG TCTCCTGTGA CACTGACGGT TGCGAAAAGC
GATCCGAAGA ATGAGATCAC CCAGGTATTC ATCAAAATCG GCGGTCTGAG GCTGGCAGGT
ACCAGCATAC AATGGACGCC GACTGCTTAT GGTCAGCAAA CGGCGACTGC TGTCGGGCTG
AGAAATGGTA AGGACTCCAT CGTGACCACC ATCAATTTCA CGGTATGGAA CAGCCAGACT
TTCGCCGGTT GTGCTTCTCT GCCAGCCTGG GAATCAACGA AGATTTATGA AGCTGCCGGC
AATATCGTTC GTTATAACAG CGTGATCTAC CGCAACCTAT GGTGGGCTGG TAGCGGCGAT
GTACCAGGTA CTAACAGCAC CTGGGCCGTT GTAGGCGCAT GTAACGGTAA TGGCGGCGAT
GGCGGTGGTA CCGGTCAGCC ATGTGGTGGC GTACAGGGAT GGACGCCAGG CGGTATCTAT
ACCCAGGGCG TGAAAGTGGC TTATGGCAAT AAGATCTATC AGGCAAAATG GTGGACACAG
GGCGATCAGC CGGATACCAA TACCGGAGAT GCGAAACCCT GGACTTTTGT AAGTAATTGT
CCGGTAGCTT TGGCGGGTGC GATAACAACA GCGGCGGTTC TCAGTCAAAC ATCAGCCACT
GAAAACACGC TGAAGGTTTA TCCAAACCCG GTGAATGGCA ACACATTGAC GGTGACCATA
GACGGTAAAG GCAAGGAGAG ACTGTTGGTA TCATTGCTGC GTGCTGAAAC CGGTCAGCCG
GTATTACAGC AGATCGTTCA GCCAAATGGC AGTGGGGCCC AACAGGTACA GCTGGATATC
AGCCGTGTAC CTTCCGGTAC CCTGATCCTG AAAGTTGACA GCGGCAGATA TGGTGTAATG
GGCACTAAGA AGATCATCCG CATAAAATAA
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| Protein sequence | MSINAAGFRP GNAGCYPIGG FFIIFAPTQN NHRTAGYTTH YAMKTARFIV FLLLCCMSTA
FSQSITDVIT SAEWDVLFPH RFNPDDRTGS GTLPTTAAKD FYSYANFREA VRLMSNIKII
SERRCATNAY KLTRVDKTTG ASVVIRQDAD FSVSPNAIIR EEIDYATFAG EGDLIVRKRE
LMAFLANISQ ETTGGWPTAP GGQYAWGLYF REEVGYEGTS NIGYREASTQ YPPAAGKSYH
GRGPIQLSWN YNYGQASEFI FGDKNVLLAN PEKVIQDGVI AFQTGIWFWM AQQYPKQSCH
DVMIPGKWEP TAAQIAGGLK PGFGATVNII NGGLECNKGT ENTKVLSRIA HYQRYTGIKQ
VSMELNGGNN AVNCGCANMA PFAIDNTECS QITALTFTSP ANGILSVTSL SPVTLTVAKS
DPKNEITQVF IKIGGLRLAG TSIQWTPTAY GQQTATAVGL RNGKDSIVTT INFTVWNSQT
FAGCASLPAW ESTKIYEAAG NIVRYNSVIY RNLWWAGSGD VPGTNSTWAV VGACNGNGGD
GGGTGQPCGG VQGWTPGGIY TQGVKVAYGN KIYQAKWWTQ GDQPDTNTGD AKPWTFVSNC
PVALAGAITT AAVLSQTSAT ENTLKVYPNP VNGNTLTVTI DGKGKERLLV SLLRAETGQP
VLQQIVQPNG SGAQQVQLDI SRVPSGTLIL KVDSGRYGVM GTKKIIRIK
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