| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5544 |
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| Symbol | |
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| ID | 8361721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7073129 |
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| End bp | 7077049 |
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| Gene Length | 3921 bp |
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| Protein Length | 1306 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967688 |
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| Product | histidine kinase |
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| Protein accession | YP_003125172 |
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| Protein GI | 256424519 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.122286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGTTTG GTACCATGTC AGGACTCAAT CGTTTTGATG GATATAACTT TAAAGTCTTC
CGCCAGATAC TCAGCGACTC GACTACGCTA TCTGACAACT TTATTACCAG TCTCATGGAA
GGTCCTGACG GAATCCTATG GGTGACACAT CGCAACGGAC AGAACATCTA TCATCCTGAA
ACAGGCCACT TCGAACGCGA TACCCGCAAT ACCCTCCGTC ATTACGGAAT CCCCGGCGAT
TCTGTTGGGC AGATCATGAA AGATAAAAGT GGTACCTACT GGTTCGTCGT CCCTAAAAAC
GGCCTCTTTA CCTATACGCC AACTACGCAT TCTGCTAAAA GGATTATGCA AGCGAAGAAC
AGCGCCATTG CTGCGATTGC GCAAGACAAT AATGACAACA TATGGATACT GCAGACAGAT
GGATTATTAC AGAAAATGGA TGCACATACT CACCGCATCT CCTGGCATAC ATCCCTGCCT
GAACAGAACG GTAGCAACAG TCAGCAGGAC TATCAGATGA TGGCCGATAG TGACGGTGAT
CTGTGGATAT TCAGTAACTC CGATGTACAA GGCGTCTATT ATTATAATCA ACATACTGCA
GCATTCACTC ACTATAATCA GAATACCGGT ACACTCCGCC TCAATAACAA CATCGTGCGC
GGTATCGTGC AGGATAACAA GGGCCTGATA TGGATCGGTA CCGACCATGG TGGCATCAAT
ATCATCGATA AAGCAAAACA AAGTATCGAG TACCTCGTCA ACAATAGTGA AAATCCTAAA
AGCCTGAGTC AAAATAGTAT CAATGCACTC TATCGTGACA ATACCGGTAT TATATGGATC
GGCACTTACA AGAAAGGTAT CTGCTACTAT CATGAAAACA TCGTTAAGTT CCCTTTATAC
CAGCACGAAG CATTTACAGC CAGTAGTCTT CCCTATGATG ATGTGAACCG CTTCGCGGAA
GATGCCCATG GTAATCTCTG GATCGGAACC AATGGTGGAG GACTGATCTA CTACGATCGC
AACCATAATA CCTACAAACA ATACCTGCAT GATGCCGGCA ATCCCAATTC ACCCAGCGGT
AATGTCATTG TCAGTCTGTG GATAGACCAG CAACAGCAAT TATGGATAGG CTCTTATTTC
GGTGGATTGG ATTGTTTCAA TGGCAACCGC TTCACCCATT ATAAACACGA TGCAGCCGAT
CAAAATAGCC TGAGTGATAA CAGCGTATGG GAGATATTCG AAGACAGCAA ACAACGACTC
TGGGTTGGCA CGCTTGGTGG CGGACTCAAT ATCCTCGACA GGACAACCGG CCATTTTAAA
CACTATGCCA ACGGAGCGCC TAATTCCATC CGGTCGCCTT ATGTATCTGC CTTCCTGGAA
GATAAAGCCG GTAATATATG GATCGGCACC GCCGATGGAT TGGATGTCAT GAATAATGCC
GGCAAGTTTA CGCATTACGA GAGTATCGAC AAACAGGCCG GTGGTATCAG CAACCGTAAC
GTCATCTGCT TGTATGAAGA CAAACGCGGT CTCATATGGA TCGGTACCCG GGAAGGACTG
AACATCTACG ATCCCACCAC TAAGAAGATC AGCATCCTGC GCAAAGAAGA TGGGCTGCCG
GATAATACCG TCCTGAATAT CCTTGAAGAC CGTGACAGCA CCCTCTGGAT GAGCACAGCT
AACGGCATCG TCAACCTCAC CCTCTTACAA CGCTCCCCTG TCTATAAAAT CAGTTGTAAA
CAATACGATG AATCTGACGG TCTGCAAGGC CGCGAATTCA ATGAAAACGC TGCGCTGAAA
ACCAGTAAGG GAGAATTTAT CTTCGGTGGT GGCAACGGCT TTAATATCTT CAATCCGCAT
AACATTGCCC TCAATACGAC CGTACCACCC ATCGTGCTGA CCGACTTCCA GGTCTTTAAC
AAAAGCATGG AACCTGGTGA ACATTTTAAC GGTCGTATCC TACTGCAACA ATCTATTACG
CGCACACAGG AAATCACCCT GAAGTACCGG GAGAACGTAT TCTCCATCTC CTTCGCAGCA
CTGAACTATT TTCATCCGGA GAAAAACCAG TATGCCTACA TGCTGGAAGG CTTCAACAAT
GAATGGTTAA CAACAGATGG CAGCGTGCGT AAAGCCACAT ATACCAATCT CGATCCCGGT
GATTATATCT TCCGGGTGCG TGCCTCCAAT AACGACGGTA TCTGGACGCC TGCGCCACTG
GAATTACATA TCACTATCCT TCCTCCTTTC TGGCGTACGC CACTGGCATT CTTTCTTTAT
ATACTGCTGA TCATTGGCGC ACTGATACTG GCCAGAAGAG TGGTATTGGA AAGAGAAAGA
CTGCGTTCAC GCATAGAACA GGAAAAACAG GAAGCACAGC GCATTCACGA ACTGGATGCA
CTGAAAATAC GGTTCTTCAC GAATATCAGT CATGAGTTCA GAACACCGCT TAGTCTGATC
ATCACACCCC TGGAAAAGAT ACTCGGCAAA GGCGTGGAAG CCAATATCCA GCAACAGCTG
ATACTTGTAC AACGTAATGC CCGTCGCCTC CTTAACCTGG TGAATCAGCT CCTGGATTTC
CGTAAAATGG AAGTACAGGA AATCAAACTA CACACCAGTG AAGGCGATAT CGTTGCCTTT
GTAAAAGACC TGACCACTTC CTTCTCCGAC TTATCAGAAA AGAAACAGAT TCACCTGGAC
TTTCATAGCA GTGTGAAAGC ACTCAACATG TTATATGATC CGGATAAAAT TGAGAAGATC
ATTTTCAACC TGCTGAGTAA TGCTTTCAAG TTTACACCGG AGCAGGGAAA TATTTCTGTG
GATGTACAGG TACAACACGG ATCTACCTTA GCGATTATCG TCAAAGACAA TGGTATCGGT
ATTCCGCTGG AACAGCAGGA ACGTATCTTC GAACGGTTCT TCCAGCATGA CATTCCCGGT
TCCCTCTTGA ATCAGGGCAG CGGTATTGGT CTGAGTATTA CAAGGGAGTT TGTCAAACTA
CATAGCGGTA CTATCACGGT AGACAGCGCT CCTGGTATGG GTAGTACCTT TACAATCCTC
CTGCCGCTAA AAGGGCTCGT CAGTCAACTG GTAGTAACGG ATCCTGTCAG CACGAATATC
CTATCCGTGC CAGCGCCGGC AGCCCTTACA CCTGCACCTT ACACAGGCAA AAAACCGGTC
CTGCTCCTGA TTGAAGACAG CGAAGATTTC AGGTTCTATC TTAAAGACAA CCTTGGTGTC
CATTTTCATA TCATTGATGC CGCCAACGGT AAACTGGGCT GGGCGATCCT CCAACATACC
GTTCCCAATC TCATTGTCAG CGACGTTAAT ATGCCTGAAA TGGACGGACT GGAACTTTGT
CGCCGGATAA GACAAAACCA GCGGCTTGCA CACTTACCGG TCATCCTGCT CACCGCCCGC
GCTTCGGAAG AAGATCAGCT GGAAGCACTG GATAACGGAG CTACAGACTA TATCACCAAA
CCCTTCAACT ATGAGGTGCT ATTATCGCGT ATCCGCAACA TTGTTTCTCA GCAGGTATCT
CTGAAAAAGA CCTTCCAGCA GCACATTGAT GCACATCCGG AGGAAATCGC CATTTCTTCA
CAGGATGAAC TTTTCCTGCA ACAGGCATTA CAGATCGTGG AGAAGAACAT CTCAAATCCT
GATTTTTCTG TAGAAGAACT CAGCCGTGGC CTCCATATGA GCCGCGTATC TGCCTATAAA
AAACTACTGT CTATTACCGG TAAAACACCG CTTGAATTCA TCCGGTCCAT CCGTTTGAAA
CGGGCCGCTC AATTGCTGGG TAAAAGTCAG CTGACAATAG CCGAAGTAGC ATATGAAGTA
GGATTCAATA ATCCTAAGTA CTTTGCAAAG TATTTCAAAC TTGAATACGG CGTCTTGCCT
TCAGCTTATA AGAACACTTA A
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| Protein sequence | MWFGTMSGLN RFDGYNFKVF RQILSDSTTL SDNFITSLME GPDGILWVTH RNGQNIYHPE
TGHFERDTRN TLRHYGIPGD SVGQIMKDKS GTYWFVVPKN GLFTYTPTTH SAKRIMQAKN
SAIAAIAQDN NDNIWILQTD GLLQKMDAHT HRISWHTSLP EQNGSNSQQD YQMMADSDGD
LWIFSNSDVQ GVYYYNQHTA AFTHYNQNTG TLRLNNNIVR GIVQDNKGLI WIGTDHGGIN
IIDKAKQSIE YLVNNSENPK SLSQNSINAL YRDNTGIIWI GTYKKGICYY HENIVKFPLY
QHEAFTASSL PYDDVNRFAE DAHGNLWIGT NGGGLIYYDR NHNTYKQYLH DAGNPNSPSG
NVIVSLWIDQ QQQLWIGSYF GGLDCFNGNR FTHYKHDAAD QNSLSDNSVW EIFEDSKQRL
WVGTLGGGLN ILDRTTGHFK HYANGAPNSI RSPYVSAFLE DKAGNIWIGT ADGLDVMNNA
GKFTHYESID KQAGGISNRN VICLYEDKRG LIWIGTREGL NIYDPTTKKI SILRKEDGLP
DNTVLNILED RDSTLWMSTA NGIVNLTLLQ RSPVYKISCK QYDESDGLQG REFNENAALK
TSKGEFIFGG GNGFNIFNPH NIALNTTVPP IVLTDFQVFN KSMEPGEHFN GRILLQQSIT
RTQEITLKYR ENVFSISFAA LNYFHPEKNQ YAYMLEGFNN EWLTTDGSVR KATYTNLDPG
DYIFRVRASN NDGIWTPAPL ELHITILPPF WRTPLAFFLY ILLIIGALIL ARRVVLERER
LRSRIEQEKQ EAQRIHELDA LKIRFFTNIS HEFRTPLSLI ITPLEKILGK GVEANIQQQL
ILVQRNARRL LNLVNQLLDF RKMEVQEIKL HTSEGDIVAF VKDLTTSFSD LSEKKQIHLD
FHSSVKALNM LYDPDKIEKI IFNLLSNAFK FTPEQGNISV DVQVQHGSTL AIIVKDNGIG
IPLEQQERIF ERFFQHDIPG SLLNQGSGIG LSITREFVKL HSGTITVDSA PGMGSTFTIL
LPLKGLVSQL VVTDPVSTNI LSVPAPAALT PAPYTGKKPV LLLIEDSEDF RFYLKDNLGV
HFHIIDAANG KLGWAILQHT VPNLIVSDVN MPEMDGLELC RRIRQNQRLA HLPVILLTAR
ASEEDQLEAL DNGATDYITK PFNYEVLLSR IRNIVSQQVS LKKTFQQHID AHPEEIAISS
QDELFLQQAL QIVEKNISNP DFSVEELSRG LHMSRVSAYK KLLSITGKTP LEFIRSIRLK
RAAQLLGKSQ LTIAEVAYEV GFNNPKYFAK YFKLEYGVLP SAYKNT
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