| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5532 |
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| Symbol | |
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| ID | 8361709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7058148 |
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| End bp | 7061426 |
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| Gene Length | 3279 bp |
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| Protein Length | 1092 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967678 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003125162 |
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| Protein GI | 256424509 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0182385 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.924407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAGA AAACGCTACT ATGCCTGCTG GTATTGTTAT GCCATGTCCT TACCAGTTCT
GTGAAAGCCC AGTCCTTATT GAAGATCACC GGTACTGTGT ACGACGAATC AGGCATACCC
GTGCCTGGAA CGAGTATACA GATAAAGGGT GGTGGTGCGA CGGTATCTGA TGCGCAGGGC
GCTTTTCAAT TGAACGCGGA AAAAGGCCGT AAACTGATAT TTACTGCGAT CGGTTACGAA
ACGCAGGAAG TAGTAGTCGA TGGTACAGCT ATACACATCA AGCTGGCTGT TGACAGAAAG
GTATTATCCG AAGTAGTAAT CACCGGTGTG GGTACTGCTA CCAGTAAAAA GAAGCTGGGT
ATTTCAGTGG AGTCCGTCAC TTCGGAGAAG CTGGTTACCG GTCCTACTTT CTCTGTGGAC
CAGGCCCTGA TCGGTAAGAT ACCAGGTGCG CAGATATCTT CTGTCAGCGG TAACCCGGGA
GACCCTGTCA ATATCCTGTT AAGGGGCGTT AATACCGTGC AGAATGGCAC CCAACCCCTG
ATCATGCTGG ATGGTGTACA GGTAGGCGCT TCTGACCTGG CTTCCCTCGA TCTGAGTACC
GTAGAACGTA CTGAGATCGT ACAAGGGGCC GCTTCTGCTT CTATCTATGG TGCACAGGGC
GCCAACGGGG TGATGCAGCT CTTTACCAGG AAAGGAAAGA AGGGCGCTAT AGCCGTGAAC
TATACAACGA ACTATTCTGC GAATAGTTAT ATTAATAGCG GTCATGTAGA AAAGGCGCGT
TTCCATCCTT ATATGACAGA TGCGAATAAC AATATCATCG ATGCCGCAGG GAATATCCTT
GATTATAATG ATGTAGGCTC CATAGAGGGC ATTTCCTACG CTTATGGCGG CGCTACCCGC
TATGGTGTAC TCGACCCGCG AAACATCGCT AATAAGCCTT ATAATGCGAA TCTGAAATAT
TACGATCACT TCAAGCAGGT ATTCCAGACA GGTTCTGTAT GGAATAACAG TATTAACTTC
TCCGGTGCCA CTGATAAAAC TGACTTTATG TTTGGCGTGT CCAATAATCA TACGGTGAGT
CCTGTCATGA AGAATGGATC GGTAGACCGC ACCAATCTGA CCGCCAATAT CGGCATGGAG
CTGTTTAAAG GCTTCAGACT ACGCTCCAAT ACACAGGTGA TCTATACAAA GAATACCACC
GTACCCAGTT TAGGTGGCGC AGGTGGTTAC CTGTATGGTA AAGGGGGCAG GGCAGGTAAT
ATCAACAATA TCTTCAGCTT TCTCAATACA TCGCCATTCT TTGACCTGAC CTATAAAATG
AAAGACGGCA ATGCACCTGC TTTCCAGACC GCCGACTTTC TAAGCATCAA CGCCTTTAAT
CCCTACTTCG TTAAACAGTA TGGAAGCGGA CTGGATAATA AGATTGACAT CCTACAGAGC
TTTAATGCCA GTTACCAGGT CAACCGTTTT GTAGAACTGG ACGCCAAGTA TGGTATCAAC
TACAGGAATG AAAATGCGAA ATGGACTTAC CTCAACCAGA CGCAGAATGC AAATACCATG
TATTATGATG CCTGGTCTTA TAACTTTGCC AGTAACGCAG AAGGAGAGAT AGATAACTGG
GATTACAACA CTACTTTCCA GAACTTCCTG GGTAGTGCCT ATATCAGAAC CGATTTTGAA
AAGGATTTTA ATATCAATTT CCCTATTCAG ACCACTACAC AGATTTCTTA TGATTACCGG
AAACGGAAGT ATAAGGAAGA AGATGTCTAC GGACTTGGAT TACCATTATC TCCGCCAGTG
AGTCTGGCGA CTGCCTCACA ATTATTTGTA GCGCCTTATT CTACAGTTAC AAAGACGACC
GGGAAATATG ATGAAACATT TATTACCTAC GGGTACCTGA TCAATCAGAA GATAGAATTC
GGGGACTATG GCGGTATCAG CGGTGGATTC AGGAGCGACT GGTCTTCTGC TTTTGGTAGC
GGCGCCTCTC CGTTTACCTT TCCGAATGTA AATGGTTATG TATTGCCCTC TGCTTTCAAT
TTCTGGTCCA GACTGGAAGA TGCAGTGCCT TATTTCAAAC TGAGAGCGGC CTATGGTGAA
GCGGGTATTC AACCTGGTCC TTTTGACCGG TATCCGACGC TTGATCAGAG TACAATCGGA
TCTGAAGTCG TGTATTCCGT ACCGATTACC AGCCAGAATC CTGACCTGCA GGTAGAAGTA
TCGAAGGAGT TTGAAGTAGG TACGGATTTT ACCTTCAATG CAGGGAAAGG CAAGTGGCTG
CGTGCAATCA ATGCCTCTTT TACCTATTGG AAACGGAAGA GCGAAAACGT GATCTATACA
GTGAGTGCGC CGTTGTCTTC CGGGGCGACA GGTATCCTGA ACAATGCGAT TGATATGTCG
TCCAATGGTT ATCAGTTCCA GTTGAATCTA CCCGTATATC AGTCGAAGAA TTTTGTCTGG
GACTTTACGA CCAATTTCGG TCACCAGACC TCTATGATCG ACCGTATCAA AGGAGGTGCA
GATATCATTC TTACTTCCTA TGCCGGCAGC ACGGCACTGG TGCTGACGGG TGGTCAGAAG
ATAGGGCAGA TCTACGGTTA TAAAGCACTG ACCAGTGCTG CTGCTACCCG TAAAAACGGG
GAGAAATATA TCTCAGAACA GGATGCAGGT AAATACCAGC TGGTAAACGG TATGCTGGTC
GATACGGCAA CAAGGGGCAT ACAGTTCTCT TCTGAGGCTT ATCCTTTGGG TGATCCTAAT
CCCAAGTTCA ACGCTTCTTT CATCAGTTCA TTCGCTTATA AAAGTTTTCT GACATTTTCC
TTTCAGTTTG ACTGGGTATA TGGGGCACAT CTGTACAATC AGACAAAAGA GTGGATGTAC
AGGGATGGTA TCCACGGCGA TTTTGCAAAA CCGATTACAC TCAATGGGGT GACGGCTGCT
TATACCGCGT TTTATCAGAG TGCTTACTCT TCCTCGTGGG GTAGTTTATA CGGACCGGGT
AACAATGCTA CCAAAGACTA TTTCTATGAA GATGCTTCTT TCCTGCGACT CCGTAATATT
TCTATCGGAT TTGATATTGC GAAGGTGCTG AAGACAAAAT ACTTCCATAA ACTACAGCTG
ATACTGACCG GCAGGAATAT CCTGACGGTA ACGAATTATA CCGGTTTTGA TCCGGAAGCC
AGTTCGGGTG CGATTGGTTC TTCCTTTGAC AGAGGCGTTG ACAACAGTAC GATCCCGAAC
CTGAAATCTT ATGCCATCGG CTTAAACGTA GGCTTCTAA
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| Protein sequence | MTKKTLLCLL VLLCHVLTSS VKAQSLLKIT GTVYDESGIP VPGTSIQIKG GGATVSDAQG
AFQLNAEKGR KLIFTAIGYE TQEVVVDGTA IHIKLAVDRK VLSEVVITGV GTATSKKKLG
ISVESVTSEK LVTGPTFSVD QALIGKIPGA QISSVSGNPG DPVNILLRGV NTVQNGTQPL
IMLDGVQVGA SDLASLDLST VERTEIVQGA ASASIYGAQG ANGVMQLFTR KGKKGAIAVN
YTTNYSANSY INSGHVEKAR FHPYMTDANN NIIDAAGNIL DYNDVGSIEG ISYAYGGATR
YGVLDPRNIA NKPYNANLKY YDHFKQVFQT GSVWNNSINF SGATDKTDFM FGVSNNHTVS
PVMKNGSVDR TNLTANIGME LFKGFRLRSN TQVIYTKNTT VPSLGGAGGY LYGKGGRAGN
INNIFSFLNT SPFFDLTYKM KDGNAPAFQT ADFLSINAFN PYFVKQYGSG LDNKIDILQS
FNASYQVNRF VELDAKYGIN YRNENAKWTY LNQTQNANTM YYDAWSYNFA SNAEGEIDNW
DYNTTFQNFL GSAYIRTDFE KDFNINFPIQ TTTQISYDYR KRKYKEEDVY GLGLPLSPPV
SLATASQLFV APYSTVTKTT GKYDETFITY GYLINQKIEF GDYGGISGGF RSDWSSAFGS
GASPFTFPNV NGYVLPSAFN FWSRLEDAVP YFKLRAAYGE AGIQPGPFDR YPTLDQSTIG
SEVVYSVPIT SQNPDLQVEV SKEFEVGTDF TFNAGKGKWL RAINASFTYW KRKSENVIYT
VSAPLSSGAT GILNNAIDMS SNGYQFQLNL PVYQSKNFVW DFTTNFGHQT SMIDRIKGGA
DIILTSYAGS TALVLTGGQK IGQIYGYKAL TSAAATRKNG EKYISEQDAG KYQLVNGMLV
DTATRGIQFS SEAYPLGDPN PKFNASFISS FAYKSFLTFS FQFDWVYGAH LYNQTKEWMY
RDGIHGDFAK PITLNGVTAA YTAFYQSAYS SSWGSLYGPG NNATKDYFYE DASFLRLRNI
SIGFDIAKVL KTKYFHKLQL ILTGRNILTV TNYTGFDPEA SSGAIGSSFD RGVDNSTIPN
LKSYAIGLNV GF
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