| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5496 |
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| Symbol | |
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| ID | 8361673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7009252 |
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| End bp | 7011048 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967642 |
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| Product | ABC transporter related |
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| Protein accession | YP_003125126 |
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| Protein GI | 256424473 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.311446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0036652 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACACC TGGCCACACT AAACAAGTAT TTTGTAAAGT ACAAATGGAG ATTCCTGACC
GGATTGACCT GTACTGCTGT ATCTATTGTA TTCAGCGTGT TCCAGCCTAT CATGGTGCGG
CAGATCTTTG ATCTGCTGGC ACAAAATCTC GATAATTACA ACCTGCTCAG CGACACCGGA
CTAAAAGCTG CTTTCCGCGG ACAATTTACC AGTGTACTGG CATTCTACGG CGTCAGCATC
CTGCTGTTTG CCCTCCTCTC CGGATTCTTC CTCTATCTGC AACGGCAATC CCTCATTGTA
ATGAGCCGTT ACATTGAATA CGACCTCAAA AACGAAATTT ACCAGCACTA TCAGCTGCTG
GATCTCAACT TCTTTAAAAT GCACCGTACC GGTGATTTAA TGAGCCGTAT TACGGAAGAC
GTATCCAGGG TACGCATGTA CGTAGGGCCT GCTATTATGT ATGCTACCCG CACCATCTTT
ATGATCGTGA TCGTGGTGTA CCTGATGATA GACGTAAACC CGTTACTGAC ATTATACACA
TTATCTCCGC TGCCTGTACT GGCGCTGATC ATCTATTATG TGAATCATAT CATTCACCGT
AAAAGTGAGC GTATACAGTC GCAGTTATCC AATATTACTT CCATTGCACA GGAATCTTAC
TCCGGTATCA GGGTGATCAA GTCCTATGTA CAGGAAGAAG ACAGCATTAA ACATTTCGAG
CAGGCCAGCG AAGCGTATAA GATCAGTTCT GTGAGCCTGG CGAAAACCGA TGCTTTATTC
CAGCCAAGTA TGGCGCTGAT GATCGGTCTG AGTGTGGTAA TCACCATCTT TATCGGTGGT
ATCCAGGTGA TCCATGGCAC GATTACCGTG GGTAATCTGG CGGAATTTGT GATCTATGTA
AATATGCTGA TGTTCCCGTT CTTTTCCATC GGAATGGTAG CATCCATGAT ACAACGTGCA
GCGGCCAGTC AGCAACGTCT CAACGAATTT CTTGATATCA AACCGGCTAT CACGGACTAT
CCTGGTGCTG TTAACATGGA TATCAAGGGT GAGGTAGTCT TTAAGAATGT GTCTTTTACA
TATCCGCATA CTGGTATTCA GGCGATCAAA AACTTCAATC TTACGGTAAA AGCTGGTGAG
AAAGTGGCGG TCATCGGTCG TACCGGTTCC GGTAAATCTA CCCTTGCACA GCTGCTCATA
CGTATGTATG ACCCGCAGGA GGGAGAGGTG TTGCTGGACC AGCAGAATAT CCGGCAGGTA
AAACTGGAAA GTCTGCGTAG TCAGATCAGT TATGTACCGC AGGACGTTTT CCTGTTTTCG
GATACGATCC AGAATAACAT CCGTTTTGGT ACGCCGGAGG CGAATCCGGA AACCGTAAGA
AAAGCCGCCC GTCAGGCTTC TGTAGAAAAG GACATCCTGA ATTTTACGGA AGGCTTTGAT
ACGGTAGTAG GGGAGAGAGG GGTGACACTT AGCGGCGGAC AGAAACAACG TATCTCCATT
GCCCGTGGTC TGATCAAGGA TCCGAACCTG TTAGTATTTG ACGATTGTCT GTCTGCCGTA
GATGCCCGAA CGGAGAAAGA GATCATTGGT AACCTCTACG CTTATCTGAA AGAGAAAACC
GCTATCATTA TTACCCATCG CATTTTCGCG TTATTTGAGT TTGATAAGAT CATTGTCCTG
GATGAAGGTA AAATCATTGA AACAGGTACA CATAACGAAT TATTGGCATT AAACGGTTAC
TACGCTGAGT TATACGCCCG CCAGCAGTCT GGCGAAGAGG AAACCGTAAT AGAATAG
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| Protein sequence | MKHLATLNKY FVKYKWRFLT GLTCTAVSIV FSVFQPIMVR QIFDLLAQNL DNYNLLSDTG
LKAAFRGQFT SVLAFYGVSI LLFALLSGFF LYLQRQSLIV MSRYIEYDLK NEIYQHYQLL
DLNFFKMHRT GDLMSRITED VSRVRMYVGP AIMYATRTIF MIVIVVYLMI DVNPLLTLYT
LSPLPVLALI IYYVNHIIHR KSERIQSQLS NITSIAQESY SGIRVIKSYV QEEDSIKHFE
QASEAYKISS VSLAKTDALF QPSMALMIGL SVVITIFIGG IQVIHGTITV GNLAEFVIYV
NMLMFPFFSI GMVASMIQRA AASQQRLNEF LDIKPAITDY PGAVNMDIKG EVVFKNVSFT
YPHTGIQAIK NFNLTVKAGE KVAVIGRTGS GKSTLAQLLI RMYDPQEGEV LLDQQNIRQV
KLESLRSQIS YVPQDVFLFS DTIQNNIRFG TPEANPETVR KAARQASVEK DILNFTEGFD
TVVGERGVTL SGGQKQRISI ARGLIKDPNL LVFDDCLSAV DARTEKEIIG NLYAYLKEKT
AIIITHRIFA LFEFDKIIVL DEGKIIETGT HNELLALNGY YAELYARQQS GEEETVIE
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