Gene Cpin_5495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5495 
Symbol 
ID8361672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7008667 
End bp7009092 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content42% 
IMG OID644967641 
ProductPUR-alpha/beta/gamma DNA/RNA-binding 
Protein accessionYP_003125125 
Protein GI256424472 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.481573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00419912 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCGTACG AAAATACCAA TCAGCAGGAA AGAAATAATG ACAGTATCTT TTCTAAACGA 
TTGAAAGCGG GCAAAAGGAG AACTTACTTC TTTGATGTAA AGACCACTCG TGGAAATGAT
TATTTTCTGA CCATTACTGA AAGCAAAAAA CGCTTTAACG ACAATGGTTA TGACAGGCAC
AAAGTGTTCC TGTACAAGGA AGACTTCAAC AAGTTCCTGA ATGCATTGAC AGAGACCATC
AACTACGTGA AAACTGAGTT GATGCCCGAC TTCGATTTTG ATGCCTACAA CCATGACTAC
GTACGTGATG ATGAAGATGG CGAAGGTGCA GAAGCTGCTG TTGAATCAGT AGTAGAAGCT
GCTGTTGTTG CAGCGCCTGT TGCCGCATCT GCTTCTTCTC ATACTGAGGA CGTAGACAAA
TGGTAA
 
Protein sequence
MAYENTNQQE RNNDSIFSKR LKAGKRRTYF FDVKTTRGND YFLTITESKK RFNDNGYDRH 
KVFLYKEDFN KFLNALTETI NYVKTELMPD FDFDAYNHDY VRDDEDGEGA EAAVESVVEA
AVVAAPVAAS ASSHTEDVDK W