| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5486 |
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| Symbol | |
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| ID | 8361663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6995061 |
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| End bp | 6998504 |
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| Gene Length | 3444 bp |
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| Protein Length | 1147 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644967632 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003125116 |
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| Protein GI | 256424463 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.370163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.067232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTTA AGATACAGGC ATTCCGTAAG GCGACTTACT ATAGACGCTG GTGTATACTA
CTTTTTTTAG TATGCGCGGG GGTCTCATTT TCCTATTTAT CCCGTGCCCA CCCTCCTACT
CTTCAACTAA GCGACTTCCA GGATGGTGAT TCCATCAAGG TTACACTAAA AGTAAGCAGA
GCCAGTCTCC GGCAAGTTAT CCGACTCATA GAAAAACAAA CCGGACTGAC CTTCGCAGTC
TCCTCCACCG TACTTGATAA TGCCCGATCC GTATCCTTAC AGGTACAACA GCAGCCACTT
ACAAGCGTAT TACGCCGCAT ATTCGCCGGC ACGAACTACG TTTTTGAGAT CCGTAATAAA
CAGATTATCG TCTATCCGGA CACCGAGGTA CCCCTAGCCA CCGGTATCAC ACACCGCCCC
ACCAGTCCCG AACCGGAAAA ATATGTCATT ACAGGCCTGA TCACTGACGG CGAACGCCCA
TTAGCAGGTG TGTCTATCCG TGAAAGAGAT ACGCATAACG GCGCCAGTAC CAATGAAAAC
GGCCGCTTTC GTATGCCTGT AGCCAACGGA CAGGCAGTCC TCCAGTTCTC CCTCATTGGT
TATGAAACCA GGGAGATCAC TCTCCGGGAT CGCAAAACAC TGGAGATCAT CCTGCAAAGC
GATACCAAAA CCCTCAATGA TCTTGTGATC ATCGGTTATG GTCTGCATAC AAAAGCCAAT
ATCACCGGCG CTATCACAAA AGTAGAAGGC CGCCGCCTGA AAAGTCGTCC CGTGACCAAC
GTCATGGCTG CTTTACAGGG TACTGCCCCT GGTCTGCTGG TAACGCGTAA TAACGGTCAA
CCCGGTAAAG AAGGTTTTAA CCTGCAGATC CGTGGTCTTT CCTCGGGCAA CTACAGTGAA
CCGCTCGTAC TGATAGACGG TGCGCCCGGG TCCATCACCC TGCTCAATCC CAACGATATT
GAATCAATCT CCGTCCTCAA AGACGCGGCA GCAGCTTCTA TTTATGGTCC GCTAGCAGCG
GGTGGCGTCG TACTCGTTAC CACCAAAAGA GGTAAATCTG GTAAAATTGC GGTTGAATAC
AGCAGCCTGT TTGGTTTCGA AAGACCGATC TCCCTGCCTG AACGGATGCA CTCCTGGCAG
GCAGCTCCCC TTGCCAACGA AGCAGCTGCC AATGCCGGCC TCCCTCCTGT ATGGACGGAT
GAAGATATCA GTCTGCTGAA GAATCCGAAT GTCAACTTTC TGCCAAGATT CGACGGCACA
CAGAACTTCA ACTACTTTGA CGACTTCAAT CCGCTGAACA GCGTCACCCG TAATAATAGT
ACCACTGCCA CTTATAATAT CAGCGCCAGA GGAGGGAATG CGGATCACCA GTATCTGTTC
TCCTTCGGCC AATTCTCCCG TCAGGGCTTA TTCAATACCG GCTCTGATAA GACTTCCCGT
ACTAACCTAC AGGCGAATCT CAACAACCGC TTCAGTGATG TACTGAGCCT GGAAACAAGT
CTTCAATACG CACAAAGCAA TACCCTATCT CCCGGATGGC GTGTAGATGG TAATTACGGT
CTGCTGAATT ACCTGTATCA GTCGCCTGCC AACGTACCGG TATACGTGCC TGGCACTAAT
CATTATACAG CAGGCTTCAA TGGCTATGCA CTGTTAAAGG ATGCCGGTAA ACGGGATGAA
CAAAGTACCT ACGCAGATGC CGTTTTCACA CTGAAAGCAG AGAATTTATA TAAAGGACTT
ACGCTGAAAG CAGTGTATAG TCCGCAGCTG ACAACCACGC ACGACGGACT CGGAAAACGT
ACTGTCGACT TCTATAACGG TGACGGATAC CTGAACAGCG TAAACAATCC GAATACATTG
AAGAGAGGTT ACCTGATGGA AGTGCAACAC AGTCTGCAGT TACTGGCCGA CTATGACCTC
TCTGCCGGCA AAGCCAATAC CGTACACATT CTCGGTGGAT ATGCCTATGA AAGTCATTAT
CAGCATCAAC GTGTAAGAAC AGGTGAACGT TTAAGTGAAA ACGAACTATC GCAGCTTTCC
TTTAATGATC CGGAGCTGAC AACACAGCTA CATTTCAAAG GCGCCGGTTC ACTGGCATCT
GTGTTTACAC GTATCAATTA TAATTTCAAA GACCGCTATT TACTGGAAGC AAATCTTGTT
GCTTCACAGC TTAGCTACAA TAGCACACAG CAGCGGGAGA TGCAGCGGGA ACACCTGTTT
CCTTCCTTCT CTGCCGGCTG GCGACTGAAC AATGAAAAAT GGTTTGCAAG CGCCTTTCCG
TTTTTTGATG AATTCAAACT GCGTGCCTCC TGGGGCATGC TGGGCAACTT TAACTGGCGC
AGCGGACTGA ATGACTTCAA TTACCGCGAT CAGTTACTAC GTCCTGCAGC ATATCCGCTG
ATGTCTTTTG AACCCAATGA CCGCTACATA CCCGGCAATA ATAATTGGGA GACGATTTCT
ACCACCAATG CCGGACTGGA TCTGACGCTT TTTAAAGGCA GACTGAATAT CAATGCAGAC
TACTTTGTGA AACACAACGG ACGTATGCAG ATTGCCGAGC AGACCTTTCC GGAAGTGAAC
TGGCTGGCGC CGCGTTTCTT TAATGCGGTA CTGCGTTCCT GGGGATGGGA ATTGAACCTT
GGCTGGAGAG ATAACCGGGG ACCGTTCAGT TACTGGATCA ATGCAAACGT CTTTGACGAC
CAGAATAAAA TCTTACGCGC CAATGGTCCT ACCGCATGGC TGAGTGGTAA TAACCGCGGA
CTGACAGGAT TACCTTACAA TGCTATCATC GGCTACCAGG CAGCGGGATA TTTCCAGAAC
AACCTGGACG TGGCCGGTCA TGCCTATCAG GGTAATGTGA CCGCTCCCGG CGATATCAGG
TATGTGGACA TTAACAAAGA CGGAAATATC AGTGGAGGCA GTCACACAAA AGATGACCAT
GGCGACCTGG TATACCTGGG CAGTTCCCAG CCGCGCTACT CCTTTGGCTT TGACGCAGGC
TTCTCTTCTA AAGGATTTGA TTTCTCTATC TTCTTTCAGG GTATCGGCGC CAGGAAAATG
CTGGTACCCG GTAAATATGC CATGCCTTTT GTGGATGGCT GGCAACAACC CTGGCTGATC
CATGCCGACC ACTGGACGCC TGCCAATCAA AATGCAGACT TTCCAAGGCT GTATGCGGGC
GATAACCAGA ATCTGACCCC AAGCTCCTTC TGGGTGATGA ATGCGGCTTA TATCCGCCTG
AAAAATCTAC AGGTGGGCTA TACTTTCCAT TTCAACGGAA GCCATCCGCT GATCAATAGT
TTGCGTCTTT ATTTCTCCGG ACAGGATTTA TGGGAGGTGA ACCGGCTGCG TATCCGGTAT
TTCGATCCGG AGCAGGCGAC CAATATGGGT TATCAGTATC CTTTCTTCCG CTCCTTTACA
CTGGGGCTGA ATGCTAACTT CTAA
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| Protein sequence | MQFKIQAFRK ATYYRRWCIL LFLVCAGVSF SYLSRAHPPT LQLSDFQDGD SIKVTLKVSR
ASLRQVIRLI EKQTGLTFAV SSTVLDNARS VSLQVQQQPL TSVLRRIFAG TNYVFEIRNK
QIIVYPDTEV PLATGITHRP TSPEPEKYVI TGLITDGERP LAGVSIRERD THNGASTNEN
GRFRMPVANG QAVLQFSLIG YETREITLRD RKTLEIILQS DTKTLNDLVI IGYGLHTKAN
ITGAITKVEG RRLKSRPVTN VMAALQGTAP GLLVTRNNGQ PGKEGFNLQI RGLSSGNYSE
PLVLIDGAPG SITLLNPNDI ESISVLKDAA AASIYGPLAA GGVVLVTTKR GKSGKIAVEY
SSLFGFERPI SLPERMHSWQ AAPLANEAAA NAGLPPVWTD EDISLLKNPN VNFLPRFDGT
QNFNYFDDFN PLNSVTRNNS TTATYNISAR GGNADHQYLF SFGQFSRQGL FNTGSDKTSR
TNLQANLNNR FSDVLSLETS LQYAQSNTLS PGWRVDGNYG LLNYLYQSPA NVPVYVPGTN
HYTAGFNGYA LLKDAGKRDE QSTYADAVFT LKAENLYKGL TLKAVYSPQL TTTHDGLGKR
TVDFYNGDGY LNSVNNPNTL KRGYLMEVQH SLQLLADYDL SAGKANTVHI LGGYAYESHY
QHQRVRTGER LSENELSQLS FNDPELTTQL HFKGAGSLAS VFTRINYNFK DRYLLEANLV
ASQLSYNSTQ QREMQREHLF PSFSAGWRLN NEKWFASAFP FFDEFKLRAS WGMLGNFNWR
SGLNDFNYRD QLLRPAAYPL MSFEPNDRYI PGNNNWETIS TTNAGLDLTL FKGRLNINAD
YFVKHNGRMQ IAEQTFPEVN WLAPRFFNAV LRSWGWELNL GWRDNRGPFS YWINANVFDD
QNKILRANGP TAWLSGNNRG LTGLPYNAII GYQAAGYFQN NLDVAGHAYQ GNVTAPGDIR
YVDINKDGNI SGGSHTKDDH GDLVYLGSSQ PRYSFGFDAG FSSKGFDFSI FFQGIGARKM
LVPGKYAMPF VDGWQQPWLI HADHWTPANQ NADFPRLYAG DNQNLTPSSF WVMNAAYIRL
KNLQVGYTFH FNGSHPLINS LRLYFSGQDL WEVNRLRIRY FDPEQATNMG YQYPFFRSFT
LGLNANF
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