Gene Cpin_5439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5439 
Symbol 
ID8361616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6950557 
End bp6951102 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content45% 
IMG OID644967585 
ProductInorganic diphosphatase 
Protein accessionYP_003125069 
Protein GI256424416 
COG category[C] Energy production and conversion 
COG ID[COG0221] Inorganic pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.706017 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACGA CGAACAATCC ATGGCATAGT GTCAGCACAG GATCAGAAGC GCCAAATGTA 
GTGAATGCTA TTATTGAAAT TCCGAAAGGA TGTCGCGCTA AATACGAGCT GGACAAAGAA
AGCGGCCTGC TGAAACTCGA CAGGGTCCTC TATTCTTCTG TTTACTATCC AGCTAACTAC
GGTTTTATCC CTAAAACCTA CTGTGATGAC CATGATCCGC TGGATATCCT CATCCTCTCC
CAGGTAGATG TGGTTCCAAT GTGTCTCATG GAAGCTAAAG TGATCGGCGT TATGCAGATG
ATCGATAACG GTGAAGCAGA TGATAAAATC ATCGCGGTAG CTGCTAACGA TATGAGCGTT
GCCCATATCA ACGACATCTC CGAACTGCCT CCTCACTTTA CAGCTGAAAT CCGTCACTTC
TTTGAAGAAT ACAAGAGACT GGAGCACAAA ACTGTAAAAG TGGCTGACTT CCAGAACAAA
GAAGTTGCTG AGCGTATCGT CCTGGAAAGC ATCGAGCTTT ACAACAAGAC TTTCGGCGAT
AAATAA
 
Protein sequence
MMTTNNPWHS VSTGSEAPNV VNAIIEIPKG CRAKYELDKE SGLLKLDRVL YSSVYYPANY 
GFIPKTYCDD HDPLDILILS QVDVVPMCLM EAKVIGVMQM IDNGEADDKI IAVAANDMSV
AHINDISELP PHFTAEIRHF FEEYKRLEHK TVKVADFQNK EVAERIVLES IELYNKTFGD
K