Gene Cpin_5434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5434 
Symbol 
ID8361611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6945530 
End bp6945925 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content41% 
IMG OID644967580 
Productresponse regulator receiver protein 
Protein accessionYP_003125064 
Protein GI256424411 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.455605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTGC ACAACATGAT TTTTATCGTA GATGATGATC CTATTCATCA GCAGATCGCG 
AACATAATGA TCAAACGACA GGGTATTGGA GAGAATGTGA GGGCCTTTTC CGATGCGCAG
GACGTGCTGG ATTATCTACG TCAATATTCC TTCCAGGCCG AGCAATTGCC TGATCTGATC
TTACTTGATC TTAATATGCC TGTTATGGAC GGATGGGATT TCCTCAATGA CTACGCCGGT
TTTTATAAAG ACTTAGCCAA ACAGATCGGC ATTTTTGTAC TGACTTCTTC CATTGATGAT
AAAGACCGCA AAAAGGTAGA TAACTATTCA TTCGTGAAAG GCTATCTCAC CAAACCTTTA
TCCAGTGAGA TCATTACGAA GTTACAAGCC AGCTGA
 
Protein sequence
MQLHNMIFIV DDDPIHQQIA NIMIKRQGIG ENVRAFSDAQ DVLDYLRQYS FQAEQLPDLI 
LLDLNMPVMD GWDFLNDYAG FYKDLAKQIG IFVLTSSIDD KDRKKVDNYS FVKGYLTKPL
SSEIITKLQA S