| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5393 |
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| Symbol | |
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| ID | 8361570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6896933 |
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| End bp | 6897961 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967540 |
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| Product | glycoside hydrolase family 26 |
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| Protein accession | YP_003125024 |
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| Protein GI | 256424371 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4124] Beta-mannanase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000752871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.295957 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTA TGAGTCTGCA TATTATTATT CTCTCTTTAT GGATGGCCTT CGGCGCCTGT
TCCAAAAATG CGAACGAAAA AGCCACCACG GGTACGGAAG AGGATACAGT ACAAAGTAAT
TTCCGCACGG TAAAATACCT GTATAGCCTG GCAGGGAAGA AAACATTGTC CGGTATCCAT
AACCGCGAAC CTAACAGTAC GCCTGCGAAA TGGACCAACG AGATCTTTAC GACTACCGGT
CGTTATCCGG CGCTATGGAG CGGGGATTTT CTCTTTCAGC AGGACAATAT TGATAACCGG
CAGAAGATGA TTGATGAAGC CGTGAGACAA TGGGAGAAAG GAGCCGTTAT CAACCTGATG
TGGCACGCCT GTAATCCGGC CAACGAAGAG CCTTGTGCGT GGGATGACGG CAAGGGCGTA
TTAAGTAAAC TGACCGATGC ACAGTGGAAA GAACTATGTA CAGATGGCAC TGTACTCAAT
CTGAAATGGA AGGCGAGAGT AGATGAAATC TGTATTTACC TGAAACAATT ACAGGATAAA
GGAGTGGAAG TACTCTGGCG TCCCATGCAT GAAATGAATC AGGGTAAGTT CTGGTGGGGC
GGTCGGCCAG GAGCGGAAGG AACGGTTAAA CTGTACCGGA TGATGCATGA TTATATGTCC
AGGATAAAGG GTCTGAATAA TCTTATCTGG GTATGGGATA TTCAGGATTT TGGTTCGCTC
GCCGGGGATG CCGTCAGCTA TCATCCGGGG GAAGACTACT ATGATATCGC CGCCCTGGAT
GTATATGATG GTTCCGGCTA TACCCAGTCA AAGTATGAGG TCATGTTACG GGCAGCGAAG
GGTAAACCGG TTGCCATCGG GGAATGTGAT AAATTGCCTA CTGTCGCGGA ACTCAGGAAT
CAGAGCAGCT GGATATTTTT CATGAGCTGG TCCGAACTGA CTTATGATAA AAATAGTAAT
GCGGAGCTGC AGCAATTATA CAACGCCGAT AACGTCATCA CGCTGGAAAA AATGCCTGGA
TGGAAATAA
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| Protein sequence | MKTMSLHIII LSLWMAFGAC SKNANEKATT GTEEDTVQSN FRTVKYLYSL AGKKTLSGIH
NREPNSTPAK WTNEIFTTTG RYPALWSGDF LFQQDNIDNR QKMIDEAVRQ WEKGAVINLM
WHACNPANEE PCAWDDGKGV LSKLTDAQWK ELCTDGTVLN LKWKARVDEI CIYLKQLQDK
GVEVLWRPMH EMNQGKFWWG GRPGAEGTVK LYRMMHDYMS RIKGLNNLIW VWDIQDFGSL
AGDAVSYHPG EDYYDIAALD VYDGSGYTQS KYEVMLRAAK GKPVAIGECD KLPTVAELRN
QSSWIFFMSW SELTYDKNSN AELQQLYNAD NVITLEKMPG WK
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