| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5387 |
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| Symbol | |
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| ID | 8361564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6886865 |
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| End bp | 6887890 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644967534 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003125018 |
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| Protein GI | 256424365 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.760663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAG GTAATTATCA GGGTCAATTG CAACAACCGA TAGGTTCAGG ATTTGATAGA
CACTCAACAG CTGCGGACGT TATGCGGGGA ATCGATCTGA CAGGAAAGAT CGCTATTGTT
ACCGGCGGGC ATTCCGGTCT CGGACTGGAA ACAACAAAGA CACTGGCGGC GGCAGGCGCA
ACTGTGATAG TGGCGGCACG TGATATAGAG AAAGCGAAGA AAAACCTGGC AGGCGTTGCC
AATGTAGAAC TGGAAGCCAT GGAACTAACT GTTCCTGCGT CTATAGATGC CTTTGCGGAA
AAGTTTCTGG CTTCCGGCAG ACCGTTACAC CTGCTTTTCA ATAACGCCGG TATTATGTGG
GTGCCATTAG CGCGTGATGC AAGGGGATAC GAGAGCCAGT TCTCGACAAA CCACCTCGGA
CACTTCCAGT TGACGGCAAG GCTCTGGCTG GCCTTAAAAC AGGCAGGAGG GGCAAGGGTA
ATCAATACTT CTTCCTGGGG GCATCATGCT TCTCCGCTGG TATTTGAAGA TCCGAATTTC
CAGCACAGGA AATATAATGC GATGTTGGCC TACGGTCAGT CAAAGACTGC CAATGTGCTT
TTTGCACTGG AGCTGGACAA TCGTGCTAAA CAGGCGGGCG TCCGTTCTTA CTCATTACAT
CCTGGTTTGA TCCTGAGCAC TGATCTTGCC CGTAATATCT CCCTGGATAC GATGAAAGCA
CTGGGTATGG TAGATGAGCA GGGCCAGGCG GTGCATCGGG AATTTAGTGG CGATAAACGC
GTAGAACAGG GTATTTCCAC CCAGATATGG TGTGCGGTTA GTCCTCAGTT GGCGGATATC
GGAGGCGTAT ACTGTGAGAA TACAGATATC GCCGTACTGG ATACAGATTA TGATCCTGCC
GCCAGCTGGG CAGATGATAT GGAAAAGATC CATGGCGTTA TGCCGTATGC ACTGGATGCA
GCAGCTGCCC GGCAGCTCTG GACATTGAGT GAAGAACTGA CAGGCGTACC GTTTAACATC
GCATAA
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| Protein sequence | MKQGNYQGQL QQPIGSGFDR HSTAADVMRG IDLTGKIAIV TGGHSGLGLE TTKTLAAAGA
TVIVAARDIE KAKKNLAGVA NVELEAMELT VPASIDAFAE KFLASGRPLH LLFNNAGIMW
VPLARDARGY ESQFSTNHLG HFQLTARLWL ALKQAGGARV INTSSWGHHA SPLVFEDPNF
QHRKYNAMLA YGQSKTANVL FALELDNRAK QAGVRSYSLH PGLILSTDLA RNISLDTMKA
LGMVDEQGQA VHREFSGDKR VEQGISTQIW CAVSPQLADI GGVYCENTDI AVLDTDYDPA
ASWADDMEKI HGVMPYALDA AAARQLWTLS EELTGVPFNI A
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