| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5383 |
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| Symbol | |
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| ID | 8361560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6883951 |
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| End bp | 6884658 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644967530 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003125014 |
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| Protein GI | 256424361 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAAT GTGTAATCAT CGACGATGAA CCATTGGCCC GTGAGATCCT GGCAGGATAC
ATCACGCAAC ACGAAGCACT TACACTCGCC GGCAGCTTCA GTAATGCACT GGAAGGAAAG
GCATTCCTGC AACACCAGGT AGCGGATCTG CTATTGCTGG ACATCGAGAT CCCCGAAATC
AGTGGTATTG ATTTCCTGCG GAGTCTGTCC CAGCCACCTA TTACCGTCTT CACCACCGCT
TTCCGGGACT ATGCATTTGA AGGATATGAA CTAGGTGTGA TCGATTACCT GCTAAAACCA
ATCTCCTATG AACGATTTGC CAGGGCGGTT GATAAAGTGA CGGAATTTCT TTCTCTTGAA
AGGCATAATG CAGACCTGGA ACTACAGCAG GAAATCCCCG CTTTCATCTT CGTCAAAAGT
GGTGTACAAA AAATCAAACT TTCCTTTGCA GATGTATCCT ATATACAGGG GCTGAAAGAC
TACGCCATCA TACATACCAC AAGCGGAAAA ATTGTGACCA AAGGCTCTGT CAAATCCATG
CAGGCGCTCT TTCCGGAAAC GCTCTTTATG AGAGTACACA AATCATTTAT CGTAGCGAAA
GATAAGATCA GGCGGGTTGA AAGAAACAGT ATCCTGATTG CAGATCAGCA GATTCCCGTT
GGCAGAAATT ACAAAGCAGC ACTGGATAAA CTCATAGACG GTTATTAA
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| Protein sequence | MLKCVIIDDE PLAREILAGY ITQHEALTLA GSFSNALEGK AFLQHQVADL LLLDIEIPEI
SGIDFLRSLS QPPITVFTTA FRDYAFEGYE LGVIDYLLKP ISYERFARAV DKVTEFLSLE
RHNADLELQQ EIPAFIFVKS GVQKIKLSFA DVSYIQGLKD YAIIHTTSGK IVTKGSVKSM
QALFPETLFM RVHKSFIVAK DKIRRVERNS ILIADQQIPV GRNYKAALDK LIDGY
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