| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5359 |
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| Symbol | |
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| ID | 8361536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6844639 |
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| End bp | 6845721 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967507 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003124991 |
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| Protein GI | 256424338 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.954819 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.588118 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGAA TCGTCATGTT TACAAGCTTG TGTGCGCTGT TATGGCACAC CAGCTGCAAG
CCACACAAAG AAGAAAAAGA AGAAGTAAGC AAGTACGCTG TTACCAGTCC GATGGTCATG
GATACTTCCT TTACTAAAGA ATATGTTTCG CAGATCCGTT CTGTGAGAAA CATTGAACTT
CGCGCACAGG AAAAAGGTTA CCTCGAAAAC ATCTATGTTG ACGAAGGTCA GTTCGTTAAA
GCCGGACAAA CGCTGTTCAG GATCATGCCG AAACTGTATG AAGCAGAATT ACTGAAAGCT
GAAGCAGAGG CAAAAGCAGC AGAAATCGAA CTGCAAAATG CAAAAACACT TGCTGACAAA
AACATCGTTT CCAAAAACGA GCAGGCAATG GCACAGGCGA AACTCGACCA GGCCAAAGCT
GAAATCGCAT TGGCAAAACT GCACCTGTCA TTTACTGAGA TCAAGGCGCC GTTCGCCGGT
ACTATTGATC GTATCCCTAA AAAACTGGGA AGCCTGATCG ATGAAGGAGA ATTGCTGACC
AGCCTCTCCG ACAACAGCGA AATGTTCGCT TATTTCAACG TATCCGAGCC GGAATACCTG
GAGTATCAGA CCAATGCCAA GAGCCGCGGC GACAACCATG TAAATCTGCT GCTGGCTAAT
AACCGCGCCC TGCCTTATAA AGGCGAGGTA CAGGTGATCG AGAGCGAGTT TGATAATGAA
ACAGGTAACA TCGCCTTCAG AGCAAAGTTC CCTAACCCGG ACAAACTGCT GAAACATGGA
GAAACCGGAA AGGTATTGAT GACAATGCCA TTAAAAGATG CGCTGATCAT TCCTCAGAAA
GCTACTTACG AGATCCAGGA TAAAAAGTAT GTGTTCGTAG TTGATAAGAA CAACGTACTG
AAATCAAGAA ACATTACTAT CAGTGGCGAA GTTCCAGACC TGTATGTAGT ACAGAGCGGC
CTGTCCCAAA ACGACAGGAT CCTGCTGGAA GGCATTCAGA AAGTAAAAGA TGACGACAAG
ATCAGCTATG AATATCTGGC GCCGCAAGAG GTGATTTCCC ACCTGCGATT GAAAGCGGAA
TAA
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| Protein sequence | MKRIVMFTSL CALLWHTSCK PHKEEKEEVS KYAVTSPMVM DTSFTKEYVS QIRSVRNIEL
RAQEKGYLEN IYVDEGQFVK AGQTLFRIMP KLYEAELLKA EAEAKAAEIE LQNAKTLADK
NIVSKNEQAM AQAKLDQAKA EIALAKLHLS FTEIKAPFAG TIDRIPKKLG SLIDEGELLT
SLSDNSEMFA YFNVSEPEYL EYQTNAKSRG DNHVNLLLAN NRALPYKGEV QVIESEFDNE
TGNIAFRAKF PNPDKLLKHG ETGKVLMTMP LKDALIIPQK ATYEIQDKKY VFVVDKNNVL
KSRNITISGE VPDLYVVQSG LSQNDRILLE GIQKVKDDDK ISYEYLAPQE VISHLRLKAE
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