| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5348 |
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| Symbol | |
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| ID | 8361525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6835237 |
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| End bp | 6836112 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644967496 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003124980 |
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| Protein GI | 256424327 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.650952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.226075 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGT ACAGGGAGAA TATTATACCG TCATCCAATA TCCTGGTGGT AAAAGAGGAA
CATTTCACCG TGAATGAGTT CCCCCTTCAC TTTCATCCGG AGTATGAGCT TATTTTGATC
CTGAATGGGT CAGGTAAGCG CTTTGTAGGT AACAATATAG CCGAATTCTC TTCCGGAGAC
CTCTGCTTTT TCGGGCCCAA TCTGCCTCAT ACCTATAGCA ATAAACATAT TGCCGGTCCG
AGGGATATCC ATCAGATTGT AGTACAGTTC AATGAAGATT TCCTGGGTAA AGGATTCTTT
GACAAAGCGC CTTTTAAACC CATCCGGGCT TTACTGGACA AATCCATACG GGGCTTCACC
TTTACGGGGG AGACCTTGCA GGAAGTGACA CGTATGATAC GGGCGATGGT AGAAATGGAT
GAAACGGCTG TTGTTATTCA ACTCCTGTCC GTGCTGTATA CACTGGCAAA ATCTGCTGAA
TTTGAGTTGT TATCCAGTCG TGGTTTCAGC AGCAAATCAG ACCGTGCTGA ATCCGAGCGC
ATGGGTAGGG TAATGGATTA TATCCTGCGT AATTTCAGAG AGGAAATTCC CCTGAATGTT
ATTGCGTCTG TCGCCTGCTT GTCGCCGGAG GCATTTTGCA GATACTTTAA AAAATATACC
CGTAAGACCT TCTCTGAGTT CCTGATAGAA GTACGTATCG GCCATGCCTG TAAATTGCTA
CAGCAGCAGC TGTTAGGTGT GAATCAGATC AGTATGCAGT CCGGGTTTAA CAATATCTCC
TACTTCAACA GGAAGTTTAA ATCAATGACA AAGAAAACAC CTGTGGAATA TCAGAAAATG
TTTGCAGCAG GCAGATTACC TGAGGCATAC GTATAA
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| Protein sequence | MKLYRENIIP SSNILVVKEE HFTVNEFPLH FHPEYELILI LNGSGKRFVG NNIAEFSSGD
LCFFGPNLPH TYSNKHIAGP RDIHQIVVQF NEDFLGKGFF DKAPFKPIRA LLDKSIRGFT
FTGETLQEVT RMIRAMVEMD ETAVVIQLLS VLYTLAKSAE FELLSSRGFS SKSDRAESER
MGRVMDYILR NFREEIPLNV IASVACLSPE AFCRYFKKYT RKTFSEFLIE VRIGHACKLL
QQQLLGVNQI SMQSGFNNIS YFNRKFKSMT KKTPVEYQKM FAAGRLPEAY V
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