| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5330 |
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| Symbol | |
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| ID | 8361507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6809112 |
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| End bp | 6810401 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644967478 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003124962 |
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| Protein GI | 256424309 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.757466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAG TCATTATCAT ATCCCTTCTC TCGCTTGCGG GGCTACAAAG CTATGCACAG
GAAGTCAGCA GTGATCTGAA GGAATTAATC AATAAATCAT TTACTTATTT CCCGCGTTTC
AGCGAACTGG AACAATCCGT GAAAACAGAG GAGGAAAGAG TTACGCTGGC AAAGGCAAAT
GGATTACCGA ATCTGACATG TAGTGCAGGG TATCGTTATT CGCATCCGGT ATCAGAGATG
ACGATACCTA TCAACGGACA GCTATCCACG TTTAAGATTA TGCCGAATAG TAATTATAAC
ACCGGTCTGA ATGCCAGTTA TGTCTTATGG GACTTTGGGG TAGTAAAGGC GAATGTGGAG
AGTGCTAAAC GTGCGGTGCA ATATGCCAAG GATAACATCG AATATAACAG GGCGCAGATG
GCTTACCAGG TAGCGGTGAT TTACTATCAG ATCGTCTATC TGCAAAAAGC AATTGCTATA
CAGGATAGTG TGCTGGCTTT TCTGAAAGCC AATAAGGAGG ATACAGAGAT AAAGCTGAAA
CACGGTGATG CACTGCGCTA TGACGTATTA TCCATTCAGT CGACTATCGA CCAGGAAAAC
AATACCCGCA TTGATCTGGA AAACTCGCTG TTGAAGCAAT ACAACCTCCT GCAGTATTCA
ACAGGTAGTA CTGCGGCCAA TGGGAAGGAT TTTGATTTCA TGCAGGCAAA CGAAAATAAA
CAGGAGGCAT TGAACATCGC ACAACAGCAT AATCCGGAGT ATACACTGCT GAAAGACAGG
ATCAGTCAGT CGGAAGCAGG ATTGGATATC AGTAAGAAAG CCGGATTGCC CTCGCTGTCT
TTGAGTGCGA GTACCGGTTT TGCCAATGGA TATATGCCTG ATCTCAATCA GTTCAGGTAT
AACTATGCAG GAGGTGTGAC ATTGAGCGTG CCTATTTATC AGGGTGCGAG AGCCAGGAGG
CAACGTAGCC TCGCACAGAG TCAGCTGAAG GAAGCGAACC TGGGTATGCA GACGTTGAAC
AATACCGTAC AGAATGATAT TAAACAGGCA TATACAGATA TTGAAAGTAA TCAGTCCAGG
TTGGTCAACG CAATGGAACA GGTAGAGGAG GCAAAAGAAG CACAGAAACT GGCGCAGAGC
AGATACAGGA ACGGAACAGG TACCAACCTG GAACTAACTA ATGCCAGTAC CAATGTACAG
CGCGCAGAGC GGTCAACATT GCAGTACACT TATCAGCTTT GTCTGGCAAG ACTGGAACTG
GCGAGAGTAC TGGGTACAAA GTACTGGTAA
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| Protein sequence | MRKVIIISLL SLAGLQSYAQ EVSSDLKELI NKSFTYFPRF SELEQSVKTE EERVTLAKAN
GLPNLTCSAG YRYSHPVSEM TIPINGQLST FKIMPNSNYN TGLNASYVLW DFGVVKANVE
SAKRAVQYAK DNIEYNRAQM AYQVAVIYYQ IVYLQKAIAI QDSVLAFLKA NKEDTEIKLK
HGDALRYDVL SIQSTIDQEN NTRIDLENSL LKQYNLLQYS TGSTAANGKD FDFMQANENK
QEALNIAQQH NPEYTLLKDR ISQSEAGLDI SKKAGLPSLS LSASTGFANG YMPDLNQFRY
NYAGGVTLSV PIYQGARARR QRSLAQSQLK EANLGMQTLN NTVQNDIKQA YTDIESNQSR
LVNAMEQVEE AKEAQKLAQS RYRNGTGTNL ELTNASTNVQ RAERSTLQYT YQLCLARLEL
ARVLGTKYW
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