| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5288 |
|---|
| Symbol | |
|---|
| ID | 8361465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 6702360 |
|---|
| End bp | 6703187 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644967436 |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_003124920 |
|---|
| Protein GI | 256424267 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.115739 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.313513 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACGG CTAATTTAGT CAGCGAAACA CTTGAGCAGT TTTATTCAGA AACGTACGAG
GAAATCAGAC TTGAAGTAGG ATTAGGCCCA CTTGAATTTG AACGTAATAA AGACCTCATT
CAGCGTTTTT TACCAAAGAA CGGTGTAGTG GCAGATGTAG GTGGTGGACC GGGTGTCTAT
TCTGCCTGGA TGGCTAAAGC AGGGTATGAA GTTATCCTGT TTGATCCGGT GCCGAAACAC
ATTGAGCAGG CAACGAAGAA GGCGGCCAAA TTCAAGAAGA ATCCGTTTAA AGCGATATTG
GGTGAAGCCC GGAAACTGGA CCTTCCTGAT GCATCTGTAG ATGTGGCGAT CCTCCATGGT
CCGCTGTATC ATTTGCAGGA AAAGCAAGAC AGAATTGCCG CGCTGCGCGA AGCATACCGT
ATATTGAAGC CAGGAGGTGT GCTGCTTGGT TTTGCCATTA ACTACACTGC TTCCACACTG
GTGGGCCTGA CCAATGGTTA TATCCATGAT AAGGCATTCC TGAAAATGTG TCAGCAGGAA
CTGGCTACAG GTGTACACAA TGCACCGGGC AGCTGGCCGG GTATTCTGCC GGAGGCTTAT
TATCACAGAC CGTCTCAGCT GGCGGCAGAA GTGAAGGAAG CAGCGTTTGA GCATATCGAT
ACTTTTGCCG TAGAAGGTGT GATCTGGCTG GATAGTAAAT ATTTTGAAAA CAGGTCAGAT
GCTGAAAAAA AACAACAGCA GTTTGCCTTG CTGCAGGCCA CTGAAAATCA TCCGGAAATG
CTGGCTATGA GTCCGCATAT GATGATTGCT GCGAGAAAGA ACGCATAA
|
|---|
| Protein sequence | MKTANLVSET LEQFYSETYE EIRLEVGLGP LEFERNKDLI QRFLPKNGVV ADVGGGPGVY
SAWMAKAGYE VILFDPVPKH IEQATKKAAK FKKNPFKAIL GEARKLDLPD ASVDVAILHG
PLYHLQEKQD RIAALREAYR ILKPGGVLLG FAINYTASTL VGLTNGYIHD KAFLKMCQQE
LATGVHNAPG SWPGILPEAY YHRPSQLAAE VKEAAFEHID TFAVEGVIWL DSKYFENRSD
AEKKQQQFAL LQATENHPEM LAMSPHMMIA ARKNA
|
|---|
| |