| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5274 |
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| Symbol | |
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| ID | 8361451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6679549 |
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| End bp | 6686682 |
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| Gene Length | 7134 bp |
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| Protein Length | 2377 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967422 |
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| Product | outer membrane adhesin like protein |
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| Protein accession | YP_003124906 |
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| Protein GI | 256424253 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01965] VCBS repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.941453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.210055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAA AATTCTTCGG AGTTCTATCG GGCATTTGCC TGATGCTCTT ACCCATCCTT
GTTTACGGAC AGTTGCCTTT CAGCCCCTGT AGTCCCACGG GAGGAAAGAA AGCCGATATT
CTCGGTGTTG AAACCAAGTA CAGGGCCCCG GGAGGAGCGC CGCCGACCTT CACCATTCCG
GCAGGTACAA AGTCCATCGT CTTGTATGCT GCATCTGAAA CCGGTATTAA TAATCCGGTA
GGAGATACAG AAATAATAAA AGGAGATGAG GACTTTATAA CGATCAATGC GATCATTGAC
ATGCCCTCGC AAACTTCTTC CGGGTTTTTG AACTACGCGA AGAATACCAA TACCCTTGGG
ACCGGGACGA ATGTATATGG ATGGAAAAAA GTAAGTCTCG GCGCTGTTAT CCCTTTTGCA
AGTAAAATAG GTGATAGAAC CCCAGACCTC AACAACGTCA GCTTCTCAAT TACCGGCTCT
ACACTGACGA TCGCAGAAAA CGCTACCAGT ATCCATTCTT CCTATCATGT TGAATATCTG
TCTCCTGCGA CAAACTCATT AAATCCGATG CCTACTGTCA TTCGCAGTAT GCTACATGGC
TCGGCTGCTG CGAGTACTGA TCTGGTCATA CCGATTCCTG CGGGAGCAAG CGTTATCAGT
ATCGTTGGTA AAGGTAGTAA TACCAGTATA GCAGACCTGG ACAGCGGGAA TGGAACAGAG
GAAGGTTATT CCAATCTGCA TTTTCTGCTG GATCTGGATA AGGCATTAAT GAATGGTTTT
GTTACGCTGG CAAACGGCGG CTCCGACGAT AGAAGATCTA CCTATGTAAT TAGTAATAAG
GATGTTTCCA CTGCAGGTTC TCTCCTGACT TCCGGCAATA TTACCGGAGA CTATGCGTCA
AAGAATGTCA ACAATGGGGC AGTAGGTATA TATGATGCAG AAGTGTATGT GAGCGGTGGT
AACCTGATTA TCAAACGTGA AGCCAATTAT GCCCGTGACT TTGACGATTC TTATGTCATC
GAGTTTTATA ACAGGGTTGG GCAGGGTATG AGTGCGGAAT TTATTGATTC TGATATCAGG
ACTATTTCCA GTGCTACCTA TCCGGCAGCA GGTGTGACCA GGTCTTTCAG AATTCCTTCC
GGTACGAACT TTATTTATTT CAACGAGACG GCCAACGCGA TCAACTTCAA CAATGAAAGT
AATGAGAATC CGCTGGCTTC CTATGCATAT ATAGACCTTG AAAAAGAAAC GGCCACCGGT
TACTATTATC AGCAGGTAGG TTCTTCTACC GGTACCGGCA GACGCGAAGA TAACTTTGCT
TTCCGTGATG TGCCGCTGGA TAGTACCAGT ACCAAGACGC ACGCCAATAC AGTTGGTTTT
AAGGCGGGTT TCCCTTATGA TCTCTCCTTT AAACTGACAG CAGATAAGAG TCAGCTGATC
GTTACCAATA AAACGGGCCT CGCGAATCAG TCTTACCAGT TCCTGTTATC GGCAGATTTC
TTTGGTGCAC GTCCGGACGT GGCCTTCAAT CCAACTAATA TCACCTTTAC TAAAGGCGCT
AACTGTAACA TTGTCAAAGC ACATGTACAG ATCTGTAACC CGGGTTCCGG TAATAACAAC
GGCGGAATGC CCATTGCTTT CTACGAAGGG GATCCTACTA CGAATGCGAA TGCACGACTT
ATATATGTAG GACTGATACC GGAGCAGATC AAAATGGGAG ATTGTAAGGA CTTTACCTTT
GACCTGGACC TGACCGGAAG AAGCAATCTG AATATTAATA TCTCCATGAT CCTGAACGAT
AACGGATCTT TTGTAACGGG TGGTGTCGGC GCAACTGTCG GTACTCCTTT TACACTGGCA
TCTTTAAGTA CGCAGGATCC TTTCTATACC GAGTGTTACT ATGATAATAA TATATATAGT
ACCACGGTGA ATGTAAATAA CTGTCCGGTG TTAAACCCGG ATCCAGATCA CAGCTCAGGT
GCGAGTGGTA ATTATAGTTA CCTGAACTAT TACCATGCAG CGAGTGCGGT GGGCGCCAGG
ATCACCGATA CAGACCTGAC CATTACTGAT CCTGATGGCG GTACTGTTGC TTCAGCGACG
ATTACCCTGT CCAACCGTCC GAATGGCAAT AATGAAGGAT TGCACCTGAA TGGTACATTA
CCGGCGGGTA TTACCGCCAC AGGCGATAGT ACCGGTACGA TTGTACTCAC TGGTGTTGCT
TCTCCGGCAG ATTATATTGC TGCCATTCAG CTGATCGAGT ACTATAATAA AGTATTAACG
CCCGATCAGA CCGACCGTAT TATTCTGACT ACCTTAAATG ATGGTACAGA GAATGGTCCG
GTGGCCACAA CGACCATTAA GATACTGGTA GACCCACGAA TCAGCGTATC CGGTAATGCT
ACCGTGATTG CTGATAATAC GACTACGGTG AATACAACTG ACGGTACAGA CTTTGGTCTG
GTACTGGCAG GTGCATCGCC AGTAGCACAT CAATTCGTTG TTCAGAATAT CGGTACAGGT
ACCTTGCACC TGACAGGTAC CCCGGTAGTG AGTATCACCG GTGATGCAGG ATTTACGATT
GCTGCACAAC CAGGCGCTGC AAACCTGGAA GGTGGCATCA GCACTAATTT CAGTGTAAGT
TTTGATCCGG CAGGACATGC GGGGAGTACT TATACAGCTA CTATACAGAT CAACAGTGAC
GATGCGGACG CCGACAGAGC GGTTTATACA TATGTTGTAA GCATATTGGT GAATAATCTG
CCTGCTGTCA GCAATAGCAG TCTGAACGTA GATGAAGATA ACACCCTGTC TTTTGCAGCA
ACTGACTTTA CTAACAACTA TAGCGATATT GATGGCGCGG CACTTACCAA AATAAAGGTA
AATACGCTGC CTGCCAATGG TACCCTGGAA TTGAACGGTG TACCGGTTGT AGCGGGCGAT
GAGATTGCGG CAGCAGATCT TGCCGATATC ACCTTTGTAC CCAACCTCAA CTGGAACGGT
ACAACCAGTT TCAACTGGGT AGCTGCGGAT CAATATGGTT ATGCGACTAC TCCTGCTGTC
ATGACCATCC ATGTGGCGCC GGTGAATGAT GCCCCTGTGG CGACTGTTCC TACCAATATC
AATGTAACAG AAGGAACGCC TGCAAGAATA GACGGTATTT CATTTGCGGA TGTAGATGCG
GGCAGTAATA CGGTAACGGT AACTATATCT GTTCCGGAAG GTACTTTCGC GGCTTCTTTA
GGTGGAGGTG TAACAGTGGG TGTATCTGCA GGAGCACTGT CACTGACAGG TACTATTGCG
AATATCAACG CGTTTATCGC TGCTGGCAGC GTTAAATACA TGACGATCCT GAATCCTTCT
CCTACGGTGC TGGTGACGGT GAACATTTCC GATAGAGGCA ACACGGGTAG CGGTGGCATT
TTGCAGGATA CGAAAACATT CCCGCTGACG ATCACAAGAG TGAATACACC GCCAACGGGT
ACAGGAGATA CAAAGACAAC TATCAGAGAC ATCCCTGTTA ATGGTGCAGT GACTGGTTCC
GACGTAGATG GAGATCCGCT GACATATACA AAGGCGACAG ATCCTGCACA TGGTACCGTC
ATCGTTAATG CAGGAGGTAC TTATATTTAT ACACCGGTAG CAGGTTATGT TGGTGGCGAC
AGCTTTACGA TCACCATAGA GGATGGCCAG GGTGGTAGTA CCACTGTAAC GGTGAATATT
ACCGTTACGC CTCCGCCAAA CAATCCGCCA ACAGGTACCG GCGATACAAA GACGACTATC
AGAAATACGC CGGTAGATGG CGCTGTGACC GGTTCCGATG CAGACGGCGA TGCACTGACT
TTTACAAAAG CAACTGATCC TGCACATGGT ACCGTAGTGG TACGTGCAGA TGGCTCTTAT
ACTTATACGC CAGCAGCTGG TTATGTTGGT GGCGATAGCT TTACCGTGAC GATTGATGAT
GGTCATGGTG GCACGACGAC CGTAACAGCA AATATTACGG TGACTCCTCT GCCGAACAAT
CCACCGACAG GTACGGGAGA TACAAAAACA ACTATCAGAG ATACGCCTGT AGATGGCGCT
GTGACAGGTG CTGATGTGGA TGGCGATGCG CTGACCTTTA CGAAGGCAAG CGACCCTGCA
CATGGTACCG TGGTAGTGCG TACAGATGGT ACTTACACTT ATACACCGGC AGCAGGTTAT
GTAGGTGGCG ACAGCTTTAC TATTAAAATC GATGATGGTA AGGGAGCTAG CACTACTGTA
ACTGTAAATA TCACGGTGAA TACACCTCCA AATAATCCGC CGACAGGCAC AGGCGATACA
AAAACAACAA CGAGAAATGT ACCTGTAGAT GGTGCGGTAA CTGGTTCCGA TGTGGATGGC
GATGCGCTGA CCTTTACGAA AGCGACAGAT CCTGCACACG GTACGGTGGT GGTACGTGCG
GATGGTACTT ATACCTATAC GCCGGCAGCA GGTTATGTCG GAGGCGATAG CTTTACTGTT
AAAATAGATG ATGGTAAGGG TGGTAGTACC ACTGTAACCG CGAATATAAC CGTGAATACA
CCGGCAAACA ACCCGCCAAC AGGTACAGGT GATAATAAAA CAACTGACCA GGATGTACCG
GTAGATGGTG CAGTGACTGG CTCCGATGTG GATGGCGATG CACTGACCTT CACAAAAGCA
ACCGATCCTG CACATGGTAC GGTGGTCGTA CGTGCCGACG GTACTTACAC TTATACACCA
ACCACCGGTT ACAGCGGTAA TGACAGTTTC ACGGTGAAGA TTGACGATGG TAAAGGTGGC
AGCATAACGG TGACAGTCAA TATTACTGTA ACACCAGTAA TCGTGCCTCC GGTGAATACG
CCGCCAACAG GTACGGGTGA TAATAAAACA ACCGATCAGG ATGTACAGGT AGATGGCGCC
GTAACTGGTG CCGATGCAGA TGGCGATGCA CTGACCTTCA CAAAAGCAAC CGACCCTGCA
CATGGTACCG TGGTAGTACG TGCGGATGGT ACTTATACTT ATATGCCGGC CACCGGTTAT
AGCGGCAATG ACAGCTTTAC GGTGAAGATC GCTGATGGTA AAGGTGGTAG TACGACAGTA
ACAGTGAACA TTACAGTTAC GCCGGTAGTC GTACCTCCGG TAAATACACC GCCGACAGGT
ACAGGTGATA ATAAAACAAC TGACCAGGAT GTACCTGTAG ATGGTGCGGT AACTGGCTCC
GATGTGGATG GCGATGCACT GACCTTCACA AAAGCAACCG ATCCTGCACA TGGTACGGTG
GTCGTACGTG CCGACGGTAC TTACACTTAT ACACCAACCA CCGGTTACAG TGGTAACGAC
AGTTTCACGG TGAAGATAGA TGATGGTAAA GGTGGCAGCA CAACAGTGAC AGTCAATATT
ACAGTAATAC CAGTAGTCGT GCCTCCGGTG AATACACCAC CAACAGGTAC GGGTGATAAT
AAAACAACAG ATCAGGATGT ACCGGTAGAT GGCGCCGTAA CTGGTTCCGA TGCAGATGGC
GATGCACTGA CCTTCACAAA AGCAAGCGAC CCAGCACATG GTACGGTGGT CGTACGTGCG
GATGGTACTT ATACTTATAC ACCGGCCACC GGTTATAGCG GTAACGACAG CTTTACGGTG
AAGATTGACG ATGGTAAAGG TGGTAGTACA ACAGTGACAG TAAATATTAC GGTAACACCA
GTAGTGGTAC CTCCGGTAAA TACACCACCA ACAGGTACAG GTGATAATAA AACAACAGAT
CAGGATGTGC CGGTAGATGG CGCTGTAAGA GGCTCCGATG CAGATGGTGA TGTACTGACC
TTTACAAAAG CAACAAATCC AGCACATGGT ACCGTGGTAG TACGTGCGGA TGGTACTTAT
ACTTATACGC CGGCAGCTGG TTATAGCGGT AACGACAGCT TTACGGTGAA GATCGACGAT
GGTAAGGGTG GTAGCATTGT AGTAGCGGTG AACATTACCG TTACGCCGGT AGTCTTACCT
CCGGTAAACA CACCGCCGAC TGGTACAGGT GATAACAAGA CCACTAACGA GGATGTACCT
GTAGATGGCG CCGTAACTGG TTCCGATGCA GATGGCGATG CGCTGACCTT TACAAAAGCC
ACAGATCCTG CGCATGGTAG CGTCGTAGTA CGTGCGGATG GCACCTATAC TTATACGCCG
GCAGCGGGCT ACAGTGGTAA TGACAACTTT ACTGTTACAA TCGACGATGG CAATGGTGGC
AGCATCACCG TGACGGTGAA TATTACTGTC AGACCGGTTA TTACTACACC GGTGAACAAT
CCGCCGACTG GTTTTGGTGA TTCTAAAACG ACGCCGGAAA GCACGCCTGT AAGTGGTACT
GTAACCGGTA CTGATTCTGA TGGTGATGCA CTGACCTTTG CGAAAGCTAC AGATCCTGCA
CACGGTACTG TTGTAGTGCG TGCGGATGGT ACTTATACTT ATACACCGGC AGCAGGTTAC
AGCGGATTGG ATAACTTCAA TATCACCATC AGCGATGGTA AAGGTGGCAC CGCAACTGTG
ACGGTGAACA TCAATGTAAC GCCGGTAGTA GTGATTGAAG ATCCGGTGGC ACTGAATGAC
AGGGGTGAAA CAAAAGCCAA TACACCTGTA ACGGTTGATA TACTGGCAAA CGATGATGCC
CGTAATTCTA CACTGGATAA AACATCTGTT GAGATTGTCG CATCACCTGC ACACGGCACG
GTGAAAGTAA ACGAAGATGG TACTGTGGTG TACACGCCTG ATCCGGGGTA TACCGGTGAT
GATAGCTTCA CTTACCAGGT GAAGAACGCA AATGGTCAGC TGAGTAATGC AGCCACCGTT
GCGGTAACAA TCACAGCAGC CGGTATCAAT GTACCGAATC TCTTTACACC AAATGGCGAT
GGTAAGAATG ACTTCTTTGA AATACGCGGT CTGAACCAGT ATGCAGAGAA TGAGCTGATT
ATTGTCAACC GCTGGGGTAA TGAAGTGTAC AGACAAAAAG GATATCAGAA TAACTGGAAA
GGTGACGGAC TGAATGAAGG AACCTATTAC TATCTGTTGC GCATAAGACG AAACGGTAGT
GCAGAATGGG AAGTGATGAA AGGATACGTT ACACTGATCA GGGCTTTCAA ATAA
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| Protein sequence | MKTKFFGVLS GICLMLLPIL VYGQLPFSPC SPTGGKKADI LGVETKYRAP GGAPPTFTIP
AGTKSIVLYA ASETGINNPV GDTEIIKGDE DFITINAIID MPSQTSSGFL NYAKNTNTLG
TGTNVYGWKK VSLGAVIPFA SKIGDRTPDL NNVSFSITGS TLTIAENATS IHSSYHVEYL
SPATNSLNPM PTVIRSMLHG SAAASTDLVI PIPAGASVIS IVGKGSNTSI ADLDSGNGTE
EGYSNLHFLL DLDKALMNGF VTLANGGSDD RRSTYVISNK DVSTAGSLLT SGNITGDYAS
KNVNNGAVGI YDAEVYVSGG NLIIKREANY ARDFDDSYVI EFYNRVGQGM SAEFIDSDIR
TISSATYPAA GVTRSFRIPS GTNFIYFNET ANAINFNNES NENPLASYAY IDLEKETATG
YYYQQVGSST GTGRREDNFA FRDVPLDSTS TKTHANTVGF KAGFPYDLSF KLTADKSQLI
VTNKTGLANQ SYQFLLSADF FGARPDVAFN PTNITFTKGA NCNIVKAHVQ ICNPGSGNNN
GGMPIAFYEG DPTTNANARL IYVGLIPEQI KMGDCKDFTF DLDLTGRSNL NINISMILND
NGSFVTGGVG ATVGTPFTLA SLSTQDPFYT ECYYDNNIYS TTVNVNNCPV LNPDPDHSSG
ASGNYSYLNY YHAASAVGAR ITDTDLTITD PDGGTVASAT ITLSNRPNGN NEGLHLNGTL
PAGITATGDS TGTIVLTGVA SPADYIAAIQ LIEYYNKVLT PDQTDRIILT TLNDGTENGP
VATTTIKILV DPRISVSGNA TVIADNTTTV NTTDGTDFGL VLAGASPVAH QFVVQNIGTG
TLHLTGTPVV SITGDAGFTI AAQPGAANLE GGISTNFSVS FDPAGHAGST YTATIQINSD
DADADRAVYT YVVSILVNNL PAVSNSSLNV DEDNTLSFAA TDFTNNYSDI DGAALTKIKV
NTLPANGTLE LNGVPVVAGD EIAAADLADI TFVPNLNWNG TTSFNWVAAD QYGYATTPAV
MTIHVAPVND APVATVPTNI NVTEGTPARI DGISFADVDA GSNTVTVTIS VPEGTFAASL
GGGVTVGVSA GALSLTGTIA NINAFIAAGS VKYMTILNPS PTVLVTVNIS DRGNTGSGGI
LQDTKTFPLT ITRVNTPPTG TGDTKTTIRD IPVNGAVTGS DVDGDPLTYT KATDPAHGTV
IVNAGGTYIY TPVAGYVGGD SFTITIEDGQ GGSTTVTVNI TVTPPPNNPP TGTGDTKTTI
RNTPVDGAVT GSDADGDALT FTKATDPAHG TVVVRADGSY TYTPAAGYVG GDSFTVTIDD
GHGGTTTVTA NITVTPLPNN PPTGTGDTKT TIRDTPVDGA VTGADVDGDA LTFTKASDPA
HGTVVVRTDG TYTYTPAAGY VGGDSFTIKI DDGKGASTTV TVNITVNTPP NNPPTGTGDT
KTTTRNVPVD GAVTGSDVDG DALTFTKATD PAHGTVVVRA DGTYTYTPAA GYVGGDSFTV
KIDDGKGGST TVTANITVNT PANNPPTGTG DNKTTDQDVP VDGAVTGSDV DGDALTFTKA
TDPAHGTVVV RADGTYTYTP TTGYSGNDSF TVKIDDGKGG SITVTVNITV TPVIVPPVNT
PPTGTGDNKT TDQDVQVDGA VTGADADGDA LTFTKATDPA HGTVVVRADG TYTYMPATGY
SGNDSFTVKI ADGKGGSTTV TVNITVTPVV VPPVNTPPTG TGDNKTTDQD VPVDGAVTGS
DVDGDALTFT KATDPAHGTV VVRADGTYTY TPTTGYSGND SFTVKIDDGK GGSTTVTVNI
TVIPVVVPPV NTPPTGTGDN KTTDQDVPVD GAVTGSDADG DALTFTKASD PAHGTVVVRA
DGTYTYTPAT GYSGNDSFTV KIDDGKGGST TVTVNITVTP VVVPPVNTPP TGTGDNKTTD
QDVPVDGAVR GSDADGDVLT FTKATNPAHG TVVVRADGTY TYTPAAGYSG NDSFTVKIDD
GKGGSIVVAV NITVTPVVLP PVNTPPTGTG DNKTTNEDVP VDGAVTGSDA DGDALTFTKA
TDPAHGSVVV RADGTYTYTP AAGYSGNDNF TVTIDDGNGG SITVTVNITV RPVITTPVNN
PPTGFGDSKT TPESTPVSGT VTGTDSDGDA LTFAKATDPA HGTVVVRADG TYTYTPAAGY
SGLDNFNITI SDGKGGTATV TVNINVTPVV VIEDPVALND RGETKANTPV TVDILANDDA
RNSTLDKTSV EIVASPAHGT VKVNEDGTVV YTPDPGYTGD DSFTYQVKNA NGQLSNAATV
AVTITAAGIN VPNLFTPNGD GKNDFFEIRG LNQYAENELI IVNRWGNEVY RQKGYQNNWK
GDGLNEGTYY YLLRIRRNGS AEWEVMKGYV TLIRAFK
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