Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5264 |
Symbol | |
ID | 8361441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6668107 |
End bp | 6668499 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644967412 |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003124896 |
Protein GI | 256424243 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.000676248 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAAAGA AAAATATAGA GGGCACTATC TGTGCAGTCG ATTTCGCATT CAGGAGAATT GGTGGTAAGT ACAAAGGGCG GATCCTCTGG TACCTGCATC AGTATGGCGT ATTACGTTAC GGCGAATTGC GGCGCAGTAT AAAGGATATT ACCACTAAAA TGCTGACACA GACCCTGCGT GAACTGGAAG AAGACGGACT GGTACACCGG GAAGTATTTC AGTCAATGCC TCCCCGTGTA GAGTATTCAC TGACAGATTC CAGTAAACAA CTGATACCTT TTATCGATCA TTTACGGCAA TGGGGAGATA AACAGATGGC AAAAGAAAAT ATCCCCGTCA TCAAGAGTAG TTTATCTTGT ATAATCACGG AGGAAGAACA GGCCGAAAAA TAA
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Protein sequence | MAKKNIEGTI CAVDFAFRRI GGKYKGRILW YLHQYGVLRY GELRRSIKDI TTKMLTQTLR ELEEDGLVHR EVFQSMPPRV EYSLTDSSKQ LIPFIDHLRQ WGDKQMAKEN IPVIKSSLSC IITEEEQAEK
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