| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5262 |
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| Symbol | |
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| ID | 8361439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6662658 |
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| End bp | 6666956 |
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| Gene Length | 4299 bp |
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| Protein Length | 1432 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967410 |
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| Product | hypothetical protein |
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| Protein accession | YP_003124894 |
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| Protein GI | 256424241 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.435656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00193947 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACTGA TGGAAAATCC CTTCAAACTG CTGGAATCCT ACACAAAGGA AGACAAGGAT
ATCTGGGGTG GCCGGTCCGC AGAAATAGAA CACCTGTACA ACCTCTCTTT TGCCGCCAAC
CTCATATTGG TATATGGCAT GTCAGGGGTC GGTAAAACCA GCCTTATTCA ATGCGGATTA
GCCAATAAGT TCAGACGCAC CGACTGGCAC GCCGTCTGGA TCACCCGGAA AGAAGACCTC
AATAAAAGCC TGACAGGAAC ACTCTCCCAG GAAGCCGGAG ATAGCCCGTC TGCGCCCCCC
TCTCCGGTAC CTGAAATCAT CCGCCGGGTC TATCTGAAGC ATTTTAAGCC CATATTCCTC
GTTTTTGATC AATTGGAGGA ATTGTTCATC TTCGGCTCAA ACGGCGAAAT TCAGGCATTC
ATAGGCACTA TAAAGGAGAT TCTGAGCAGT GACATACAGT GTAAGATCAT CCTGGTCGTA
CGGGAAGAAT ACCACGGCCA TCTCAAAATA TTACAGGATG CCGGCCTGCC CGTCTTTAAA
GCCTCCGTCA AAATAGAACC CATGAGTATT CCGGAGGCGA CAGAAGCCGT CTCCAAACTC
CTGGATAAAT ACAATATTCA GACGCCCGAT GCCGATCACC GGTCCTGTGC GGCTAAAATA
GCGACCGACT GCTCCATCGA CAGTCGTGTA GACCTGGCCA ATCTCCAGGT TTACCTCTTC
TGGGCATGGG AAAAAGCCGC CGAAAAAGCA CCGCCCGACG CAGATATCGC CTTCACTCAT
AACATCCTCC GGGAAATCGG GGATGGCAGA AATGTCCTCA CGCGCTACCT GAACGCCGTC
GTTGAACGGG TATCCAAAGG AAAAACAGGT GGTGTGTGGT TCCTGCTACA GCACTTTGTG
TCCCGCTCCC AGACCAAACA GCCCCTGCGC CTCGCAGAAT TGCAGGATAT CGACCAGCAG
ACCGCCCGCA TGTGGCTCAA CGAACTGAGT AAAAGCAAAC TGGTGAAATG TGGCCGGGAA
ACTGACAATG AAGTCTACAA CCTGACACAC GATAGCCTCG TCCCCCTGAT CATACTGAAG
AAAACCGCCG CTTCCAGGGG CCGGAATATC CACCCCAGCG TAAAGGGGAA TCCCTTCAAA
GGACTCCCCG CCTACGAAGA AAAAGACGCC ACGATCTTCT TCGGCCGCAG TCTTATTCTC
CGCGAACTGC TCACCTTCTT CGAAGACAAA CGCCTGCTCG TCATCGTCGG CCCCTCCGGC
TCAGGTAAGT CCTCCATCAT CAAGGCCGGT ATTATTCCCG CTCTGAAAAC AGAAGGTTAC
ACCGTCATCC ATGGTGAACC CGGCACTCAT CCCATGGTCT TTGGACGGGA AATACAACGA
CGGCTGACAG ACCTCAACGG GGGCAGATCG CTCATATACA TCGACCAGTT CGAAGAACTC
AGCACACAAG CCAGTACACA GGAAAGCGAA GAGTTCATCC GCCTGCTCAA TGATGTCCAG
AACAACGCAG ATCCCGCCCT CCGGCAACTG AAAATCATCC TCAGCGTCCG CGCTGATTAT
GAATATGAAT TCGAAAGAGC CCTCGGCGGC TGGCGGGAGG CTAAAAAGAC AATTCCCGAC
CTGATGGAAA GCGCCGTCAG AGAGATCATT ACCGAACCGG CTTATCTCGC CGGACTGGAA
TACAAACCGA CCTATCTCGT TGACAATATC GTACGCGATG TGATGCAGTC CAACGGCACA
CTTCCCCTGC TCTCCTATGC ATTGGAACAG ATGTATATCG AGTATGAAAA AAGCGGCGTC
AATGACGGCT TCCTCACAGA AGACCATTAC AATGCCATCG GCGGTGTTGT AGACGGATTA
CGGCTCCGGG CCTCCAAACT ATACAGCTAT TCTGATCCGG AAACCCAGCA TACGATCAAA
AACGTCATGC TTCGTATGCT CTCCCTCAGT ATCAATGAGA AAGCCTCCAA GAGAATACTG
GCGGAAGACC TGGTATATGA AAGTCCGGTA GAAAACGAAC GTGTACAGAA AGTACTCAAC
GAACTGGTCA ACAGCCGCCT GATCGTATCC GGTCCGGACG AAAACGGCCA GATCTACTAC
GAACCAGCCC ACGATTCCCT GATCCGCTCC TGGAACCTGA TCGGCGACTG GATCAAACAA
TATGGGAAAG ACCTGCTCTA CCTGCAACAG GACCTCTCTG ATGCCGTCAA ACAGTTCAGA
CTCAACCCCA AAAAGCTATG GCATGACGAC CCGAAATTGA ATACCCTGCT GAATATCATG
AAGTCGCCCG ACAACTGGTT AAACAGACAG GAAACCAATT TCGTGAAGAA AAGTCTGCAG
CGCAGAAACG AACTGGAAGA CAGAAAGAAA AGACGCGAAC AGGAACTGGT GGAAGAAAAA
ATCAGTCGCC AGGAAGCAGT CGCCAAACTG AGTACGGAAA AGGAAAAAAG AGAGAAAGAA
CTGCTGGAAG AAAAGCTGAG CAAACAGGAA GCCATCGCTA AACTCAACAG TGAAAAAGAA
GCCGTTCTCC TGGAAAAACT CAAAGGAGAA AAAGCAAAGA CCCGGCTGCA AAAACAAAGA
ACCATCCTGC TGGCACTGGG ACTCATTTCC CTGCTGATAG CCGCCAGTTA CGTCTATAGT
CAGTGGAATA AATCAGAGAA ATCTGTATTG CAGATAAAAG AACTGAACCA CCGTTTGCAA
AGCTCCGCCG ATGATCTCAC AAAACTCAAC CAGTCGCTGA ACGTCATCGC AGAAAAAGCC
AGACAAAGCG CAGTAGAAGC CAATATCGCC AGACAAAAAG CGGATTCCGC TGCCAGCAAA
GAAAAGAAAG CGCGTACCAT TGTTGAAAAA CAAAAGAAGG AACTGCTGAT CAAACAGAAT
GCACTGATAT CATCACAGGA AGAAGTAAAA AGATATTCCC TGTCGTTACA GGCGAAGGCA
GACTCATTAC GTACTTATTC AGACTCGCTG AAAACACAGC TCGTCATCAT CCAGAATAAA
ACCAGGGAAG TTGAACATGC AAAACTGACA GCGGCCTATC TCACGAAATC CCGCTCCCTC
ATGCATTCAG ATCCTGCTAT GGCTTATCAG CTGGCGCTTG AATCTTTGAA ATACGACAGC
GGTAACCAGA AGATCAAAAA CTATATTCAC GATACCCTGA ACAACCGCAA TACCTTCTAC
GAATCTTTTA TTGTTGATAA TGTCTCTTCC GCCTTCTTTG CTGATAATGG AAAAACAGTG
CTCGCGATAC AGGGAGATAA TAAATTCAGG CTACTGGATC TATCCAATCA TAAAGATACC
AGCATCGTCA TCAATGGAAA GATTCTCTCT GCACAATTCA GTCCGGTGGA CAATAGTGCA
TTGATCGCTA CCCGCAACAA TATCTTTAGT TACAACGCCA ACGGCGGACT GAGAGCCACT
TCTGAAAGAA TGGAAAATGT AGTAAAAGCC ATGTATACCG CCAGAGGCAG GATCATTGTC
GTCACGCCGG CAGAAGTACA GATCCGGAAA AATGTTAACG CTACAACAGC AGTAGTGATC
CCTTCGGGGA ATAATGGCGA TGATACAGAA GTCAGCTCCA ATGATTCCTT ATTATACATC
AGAAAGAATG ACGTTATTGA AGCGTATGAC CTGACTAACG GCAGACTGAT ACGCACTTAC
CAGGAACCAA ACAGTTTCCT GGCCAAAGGA GGTAACGGCT TCATCGCAGT GTCCGGAAAA
AGACTGCTGC TGGCGAGAAG TGCAGGCAAT AAAGTCCTGA CGGAAAGATA CTTTGTACCA
CTGGAAAAAG ACTATTCCAG GGTCTCTATT GTCAGCATCG CGGATAATCT GCGTACCCTG
CTCTTTATGG CGGAACCGGC CGAACAGCAA CAGATGCAAC AACAGCAACA GGTACAGCAA
CAACAGATCA GTAAAAACTT TATCAGGCCA CAGCTGACTA ATCCGCCAAT ATTATATGCA
TTCAGTCTGC CGAAGAGCAG CAGAAAATTA CCCGGTAATA TTCCTTATGC CAGACGTGTC
GTACTGTCTG AAAACGGGAA CTATATCATT ACAGGTGAAA GCGGATCTCT GTCCATATAT
GATAACAACG GGTACCGTGT AGAGAATTTC GGGGGTTATG CAAACTATAC CATCTGGGCC
TTCAACCCGG TCAATACAGA TATGATCATG AGCATGAATG GCGTCAAACT CAAACTATGG
CTAAAAGGTA CGCCGGATGC ACTCTCCGCA CAAAGAAAAT TGAGAACATT CAGCTCCGCC
GAACTGGAAA AAGCATTGGA AGATATTGCT ATCCGATAA
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| Protein sequence | MKLMENPFKL LESYTKEDKD IWGGRSAEIE HLYNLSFAAN LILVYGMSGV GKTSLIQCGL
ANKFRRTDWH AVWITRKEDL NKSLTGTLSQ EAGDSPSAPP SPVPEIIRRV YLKHFKPIFL
VFDQLEELFI FGSNGEIQAF IGTIKEILSS DIQCKIILVV REEYHGHLKI LQDAGLPVFK
ASVKIEPMSI PEATEAVSKL LDKYNIQTPD ADHRSCAAKI ATDCSIDSRV DLANLQVYLF
WAWEKAAEKA PPDADIAFTH NILREIGDGR NVLTRYLNAV VERVSKGKTG GVWFLLQHFV
SRSQTKQPLR LAELQDIDQQ TARMWLNELS KSKLVKCGRE TDNEVYNLTH DSLVPLIILK
KTAASRGRNI HPSVKGNPFK GLPAYEEKDA TIFFGRSLIL RELLTFFEDK RLLVIVGPSG
SGKSSIIKAG IIPALKTEGY TVIHGEPGTH PMVFGREIQR RLTDLNGGRS LIYIDQFEEL
STQASTQESE EFIRLLNDVQ NNADPALRQL KIILSVRADY EYEFERALGG WREAKKTIPD
LMESAVREII TEPAYLAGLE YKPTYLVDNI VRDVMQSNGT LPLLSYALEQ MYIEYEKSGV
NDGFLTEDHY NAIGGVVDGL RLRASKLYSY SDPETQHTIK NVMLRMLSLS INEKASKRIL
AEDLVYESPV ENERVQKVLN ELVNSRLIVS GPDENGQIYY EPAHDSLIRS WNLIGDWIKQ
YGKDLLYLQQ DLSDAVKQFR LNPKKLWHDD PKLNTLLNIM KSPDNWLNRQ ETNFVKKSLQ
RRNELEDRKK RREQELVEEK ISRQEAVAKL STEKEKREKE LLEEKLSKQE AIAKLNSEKE
AVLLEKLKGE KAKTRLQKQR TILLALGLIS LLIAASYVYS QWNKSEKSVL QIKELNHRLQ
SSADDLTKLN QSLNVIAEKA RQSAVEANIA RQKADSAASK EKKARTIVEK QKKELLIKQN
ALISSQEEVK RYSLSLQAKA DSLRTYSDSL KTQLVIIQNK TREVEHAKLT AAYLTKSRSL
MHSDPAMAYQ LALESLKYDS GNQKIKNYIH DTLNNRNTFY ESFIVDNVSS AFFADNGKTV
LAIQGDNKFR LLDLSNHKDT SIVINGKILS AQFSPVDNSA LIATRNNIFS YNANGGLRAT
SERMENVVKA MYTARGRIIV VTPAEVQIRK NVNATTAVVI PSGNNGDDTE VSSNDSLLYI
RKNDVIEAYD LTNGRLIRTY QEPNSFLAKG GNGFIAVSGK RLLLARSAGN KVLTERYFVP
LEKDYSRVSI VSIADNLRTL LFMAEPAEQQ QMQQQQQVQQ QQISKNFIRP QLTNPPILYA
FSLPKSSRKL PGNIPYARRV VLSENGNYII TGESGSLSIY DNNGYRVENF GGYANYTIWA
FNPVNTDMIM SMNGVKLKLW LKGTPDALSA QRKLRTFSSA ELEKALEDIA IR
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