| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5247 |
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| Symbol | |
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| ID | 8361424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6643923 |
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| End bp | 6647921 |
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| Gene Length | 3999 bp |
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| Protein Length | 1332 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967395 |
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| Product | hypothetical protein |
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| Protein accession | YP_003124879 |
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| Protein GI | 256424226 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000167515 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGCTT CAGATAACAT ATCGAATAAC CTGGTACGCG ATGGTGTAAG CCAGTTGCAG
CGGAAAATGG ATGCGCTGTC AACCGACAGG GTACAGATTG ACGAACGCAG TACTGCACAG
TTACTGGGTT TCCTGTACCG CTATGCCAGA TATGTACTTT ACTATAATGA TACTGATCAG
CCGTCCCGCC GGGCAGATAC ACCGCTTGTA TCGCGCGGGG ACTGGCAGGA TTTCTTCCGG
AACAATCCTC CTTTCCAATA TGCCGCCATC CAGCAGTTTG ATACGGCCGG TTTTGACGCC
GCCTATCAGA AGGCCAGGAC GGAGCTGTCG CAGCAATTGC CTGCCGATCA GTTCTGGTCC
ATGTTCTTCC GCATACTGGA TATGGTGATG CAACTGGACA GCTGGAATAC GGACCTGGAT
ACCGGCACCG GATTGAGTGG CATGTTGAAT GCGCTCGTTC AGTCTGACTT CAGTAAAGCA
TTATACCGGC TGATTGCTAT TGCCAATACG ATGGTAGATG CGGATCATCC TTTACCGGAT
GAAGCGGTGA ACAATATCGC CATCCTCCGC AGCAATCCAT CCTGGTCATT GACCATGGAC
AAGCTGATCG CGAAAGATGC TTACCTGGTA AGACTGGGTA ATTATCCCCG CAGGAAAAGA
GAGAAAATGC TGACACAGCT GGACGAGCTG TTTGTCATCT TCTATAAAGG TATTCAGCAG
GTACAGGGTT TTGCCGTGCA GGATTTTGAT GCCGTGATGA ACGGTTCGCA AAAGCATCAG
CCGCATGTTG GTTTGCTGTA TGGCTTCCTG CAACTCTTTG CCCAGGTAAA GACACAGCTG
AATACACTGG GGCGTCAGCA CCTGAACTTC TTTTATGAAG AAGTGCTGCA ACTGAAGAAG
AAATCACTGA CGCCGGATCA TGTACACCTG GTAGCAGAAT TGGCCAGGCA GCTGCCGGAT
TATCTGCTCG AAGATAACAC GGGCGTAAAA GCCGGTAAAG ATGCATTGGG TAATGATGTT
ACTTTTTATA CGGAAGAAGA TGTTGTATTA AACAAAGCTA AAGTTGCAGA GTTGCGTACG
CTCTTCAAAG ATGAAAATGC GAATATCTAT ACGGCTCCGG TAGCGGCAAG CGCTGACGGA
TTGGGAGATG GCTTCCGTAA TCCGGCTTAC AACAGCTGGC CTTTACTGGG TGCTGCCCAA
TATGTCAGCA AGAATAATCC GCAGGCAGGT GTATCTCACT TTCCATTTGG CACAACGGGG
CTGTTACTGT CTTCTCCTGT ATTACTGCTG AAAGAGGGTA CGCGTAACGT AACAGTAACG
ATCGAACTCA CACCGCCTGC GGCGAAAGCA GACCAACTGG CGGCCTTATT GGCCAAACCT
TTTTACCTGC TTAACGAAGA AATACTGACG GCCTTTGAAA AGGCAGCGAT CGATAAAGCC
ACTGTAGCTG CGATCCGTAG TAAACTGAAA ACAGCCGGTC TGACAGAAAA GTGGCTGGAT
GATGAAGCAG GAGATAATGA ATTCAGGATC TACACAGGCA TCAGTGCGCA GCAGTTACAA
TTGGCAAAAG ATATCGCACG GAAAAGATTG TTACAGGTAG ACTGTACCAC CGCAGACGGA
TGGTATCCTG CACCCGTAGC AGCGATATCA CTGGCGGCAG GCGTCATGAC CATCAACTTT
GAACTGGCCG CAGATGCACC TGCATTAGTA GCGCCAATAG CTGATGTGTT ACAGGCCAGT
TATCCGGTGA AAGATCCTTT GCTAAGGATA CTCTTTAATC ATGGTTTACA TTTTCACCTG
GCAGAGCAGG ATGAACCCTG GTATGATGTG CTGAGTAACC TGGTTGTGGT TAATACATCG
ATCAGTGTAC ATGTTACCAA TATTAAAAAT CTGCTGATCG GTAATGATGA AGGTCCGCTG
GACCCGAACA ACAAGTTCAT TCCTTTCACC AGTGTGCCGA AAGCGGGCGG CAACTTTTAC
ATCGGCAGCG ATGAAGTATT CCGGAAGAAA CTGACAGATG TAAAACTGAA TATGGAGTGG
GAAGGATTGC CTGACAATTT CGCTACCCAT TATTATGCTT ACAATATGGG TATCTCCAAT
ACCTACTTCA CTGCTTCGCT GCAAAGATTG AATAACGGAC AGTGGGAGAA TATCCCTGGT
GGTAATGGAA TACAGCTGTT TGATCAGGAT GGCGGCAATC ATCTGCAAGC GCTGAAACAG
ATTACGATAC CGGCTGCAGG CAGTATTCCG GTCCTTAAAC AATCCGCGCC TTTACTGCCG
TATAACAATG CTGCCCTTTA CGGTTTCCTG CGTTTCAGAC TTGATAAGAG TTTCAAACAA
GAAGAGTATC CAGGCATACT GGCTGATCAG CTGATCAAAA TAGGCAATCT TAAACTGAGT
GTGCTGCAGA CGAATGCAAG TGGTTTACTG ACACAATCAC TCGATGCGTA TACAAAAGCA
TGGAATGTAG CTGGTCTGGC GGCTAATCTG CACAGCGGTG ACCCCGAACA GGAACACGCA
GACCTGAAAG TGGCAGCAGA CGGCGTTACC AGCAGTACAG CCAACACCTA TAACAAAGCG
GCATCACTCG ATGGCTATGT GAACGGTACA TCCGGTAATG TACTCGGTTT CCCGCCGCCA
CCTTATACGC CTGTTATCAA ATCATTTACC CTGGAATATG CGGCTGCTGC GAGTGGCGCA
GATATTACGC TGCTGCATCA GTACCCTTAT GAGCCAGGTA ACTATAAACT CCTGTCATCC
GGTACGACCG CTCATTTTAT GCCGGTGTAT GATGATGAAG GTACTTTGTA TGTCGGTCTG
CAACAGGCCG TACCTGGTAC AAATGTCACA CTGTTGTTTC AGCTGGCAGA GTTTACCGCA
GATCCGGATA TCCGCAAGGC AGCTATCAAA TGGCATTATA TGTCAGGCAA TGAGTGGAAG
ACACTGGAAG ATCATTCGCA GATCATCAGT GATACCACCC AGGAGATGCT GGTATCGGGT
ATTGTAACGA TCGCGTTGCC ATGGGATGCG GATACGACAC ATACTGTATT GCCATCCGGT
TATCACTGGC TGCGTATCAG TACACATCTC TATTCAGCTG CTGTATGTGA AGGGGTAGCG
GTGGTAGCAC AGGCGATAAA AGCTACATTC CGCAACCAGG AGAATGATCC TGCAAGAGTA
GGGACGGCAT TGGCAGCACA GACTATCAGC GGACTGGTTG TACCCGATGC GATGGTGACG
AAGATCAGTC AGCCTTATTC CTCTTTTGGC GGCCGGAAAG AAGAGACTTC AGATGAATTC
TATATACGCG TCAGCGAACG TCTGCGTCAC AAAGGAAGAG CGATTAATGT TTTTGACTAT
GAGCGTATCA TCCTGGATGC ATTTCCTGAG ATCTTCAAAA TTAAATGTAT TCCGCATTCG
AAGATGTGCA GGGACGAGGC TGGCAGCATC AGGCAGTTAC AATCACCCGG CTGGGTTACA
CTGGCTGTGA TACCACGTAT TGATGAGTAT CCTGCCGATG AACGATTCAG TCCGAAGGTA
AGCCGCATTA TACTGGAGAG AGTGAGCGAA TACCTGAGCA GCCGTACGTC GGCTTTTGCA
AAGGTGCAGG TCATCAACCC GGTATACCAG CCGGTTAGCT TTAAAGGCAA TATTCGCCTG
AGAGCCGGCA GAGATGCGAA TTTCTACCTT AAGAAACTGG TCAGCGAAGT ACAGGCTTAT
CTGTCACCAT GGATCAATAC GGGCGCACAG GATATCGTGT TTGGCGGTAC CATGATGATG
TCTTCCGTAT TACAGTTTAT CGAACAGCGG GAATATGTCG ACTACGTAAC CGACTTTACC
ATGTTTGATA AAAAGGATGG TGTGGAAGGT CCGCCGGTAA AGGCGATCAC TGCCGATACC
CCGTGGTCGG TACTCATAGG AGGAGAACAA TCATACACAA ATATTATCAC CGATTCCTGC
ACAGCAGCCA GTCAGCAAGC GGTATTCAGG ATCAAATAA
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| Protein sequence | MNASDNISNN LVRDGVSQLQ RKMDALSTDR VQIDERSTAQ LLGFLYRYAR YVLYYNDTDQ
PSRRADTPLV SRGDWQDFFR NNPPFQYAAI QQFDTAGFDA AYQKARTELS QQLPADQFWS
MFFRILDMVM QLDSWNTDLD TGTGLSGMLN ALVQSDFSKA LYRLIAIANT MVDADHPLPD
EAVNNIAILR SNPSWSLTMD KLIAKDAYLV RLGNYPRRKR EKMLTQLDEL FVIFYKGIQQ
VQGFAVQDFD AVMNGSQKHQ PHVGLLYGFL QLFAQVKTQL NTLGRQHLNF FYEEVLQLKK
KSLTPDHVHL VAELARQLPD YLLEDNTGVK AGKDALGNDV TFYTEEDVVL NKAKVAELRT
LFKDENANIY TAPVAASADG LGDGFRNPAY NSWPLLGAAQ YVSKNNPQAG VSHFPFGTTG
LLLSSPVLLL KEGTRNVTVT IELTPPAAKA DQLAALLAKP FYLLNEEILT AFEKAAIDKA
TVAAIRSKLK TAGLTEKWLD DEAGDNEFRI YTGISAQQLQ LAKDIARKRL LQVDCTTADG
WYPAPVAAIS LAAGVMTINF ELAADAPALV APIADVLQAS YPVKDPLLRI LFNHGLHFHL
AEQDEPWYDV LSNLVVVNTS ISVHVTNIKN LLIGNDEGPL DPNNKFIPFT SVPKAGGNFY
IGSDEVFRKK LTDVKLNMEW EGLPDNFATH YYAYNMGISN TYFTASLQRL NNGQWENIPG
GNGIQLFDQD GGNHLQALKQ ITIPAAGSIP VLKQSAPLLP YNNAALYGFL RFRLDKSFKQ
EEYPGILADQ LIKIGNLKLS VLQTNASGLL TQSLDAYTKA WNVAGLAANL HSGDPEQEHA
DLKVAADGVT SSTANTYNKA ASLDGYVNGT SGNVLGFPPP PYTPVIKSFT LEYAAAASGA
DITLLHQYPY EPGNYKLLSS GTTAHFMPVY DDEGTLYVGL QQAVPGTNVT LLFQLAEFTA
DPDIRKAAIK WHYMSGNEWK TLEDHSQIIS DTTQEMLVSG IVTIALPWDA DTTHTVLPSG
YHWLRISTHL YSAAVCEGVA VVAQAIKATF RNQENDPARV GTALAAQTIS GLVVPDAMVT
KISQPYSSFG GRKEETSDEF YIRVSERLRH KGRAINVFDY ERIILDAFPE IFKIKCIPHS
KMCRDEAGSI RQLQSPGWVT LAVIPRIDEY PADERFSPKV SRIILERVSE YLSSRTSAFA
KVQVINPVYQ PVSFKGNIRL RAGRDANFYL KKLVSEVQAY LSPWINTGAQ DIVFGGTMMM
SSVLQFIEQR EYVDYVTDFT MFDKKDGVEG PPVKAITADT PWSVLIGGEQ SYTNIITDSC
TAASQQAVFR IK
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