| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5230 |
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| Symbol | |
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| ID | 8361407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6609203 |
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| End bp | 6609937 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967378 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003124862 |
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| Protein GI | 256424209 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.236835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.031416 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTTTAC GATGTCTGAT AGTAGATGAT GAACCACTCG CACATGAGGT GATCCTGCGG
TATATGGAAG ACGTACCCTT CCTGCAGACC GCCGGACAAT GCTACCGGGC GATGGAAGCG
CTGGAATTCC TGAGCCGGCA GCCTGTTGAC CTGATCTTCC TGGATATCCG GATGCCTAAA
TTGAATGGGC TTGATTTTCT GCGGACTTTA CAACAGCAAC CCATCGTGAT CATTACCTCC
GCTTATGAGG AACACGCCCT GGAAAGTTTT GAGCTGGAGG TCTGTGATTA CCTGCTGAAG
CCATTCCGTT TCGACCGTTT CCTAAAAGCC GCCAACAGGG CTTTATCAAT TTATAATCTT
AAACAACAGG CGGGTAATAA TACGCCTGTA GCGGTTTCTG CTACCCCTAC AGAACCCGCA
GCGCTTTATA TCAAATCGGA TAAGAAACTG ATACAACTGA ACCCGGAAGA ACTGTACTAT
TTTGAAAGTT TAGGTAATTA TGTCAAAGTA TGGGATGCCA GTCGTTTTGT GCTGACGCCG
CGTACGCTTT CCAGTTTTGA GAGCCAGTTG CCCGCCGATA CGTTTATCCG TATCCATAAA
TCTTATATCC TCAATAAAAA ATTTGTGCGT TATCTTGAGG GCAATACCAT TACCCTGAAA
AATGGTAAAC AGCTGCCGCT CGGTAAAAAC TACAAACATC AGGTGAAGCT GTTGCTGGGT
GGACAGGGTA TCTGA
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| Protein sequence | MSLRCLIVDD EPLAHEVILR YMEDVPFLQT AGQCYRAMEA LEFLSRQPVD LIFLDIRMPK
LNGLDFLRTL QQQPIVIITS AYEEHALESF ELEVCDYLLK PFRFDRFLKA ANRALSIYNL
KQQAGNNTPV AVSATPTEPA ALYIKSDKKL IQLNPEELYY FESLGNYVKV WDASRFVLTP
RTLSSFESQL PADTFIRIHK SYILNKKFVR YLEGNTITLK NGKQLPLGKN YKHQVKLLLG
GQGI
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