Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5229 |
Symbol | |
ID | 8361406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6608772 |
End bp | 6609179 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644967377 |
Product | NUDIX hydrolase |
Protein accession | YP_003124861 |
Protein GI | 256424208 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.354161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.044426 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGCAT TAAAGACCGT AGGGCTCCTG GTAGTCCGGG ACAGGAAATT ATTACTGGCA TTCAGCAGAA ATAAACAATG TTTTTATTTA CCCGGCGGCA AAGTAGATGA AGGGGAGACG GAGAAGGGCG CGCTTTGCCG GGAGATCGAA GAAGAGCTGC ATGTGCAGCT GACAGAAGAA GACCTTGAAT ACTATACACA TATCACAGCG CCTGCTTTTG GCGAAAAGAG AGGCGTGATT ATGGAACAGG ACTGTTACCT GGTACACCGG GACATTGAGC CGAAACCGGC TGCTGAAATA GGAGAGATCC GTTTCTTTTC TTCGGATGAA TATGCAGAAC AGTCTGCACA AGCCCCGGGG GCAATCGCTA TTCTGAAAAT ATTACAGGAA GCGGGATTAG TTGATTAA
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Protein sequence | MVALKTVGLL VVRDRKLLLA FSRNKQCFYL PGGKVDEGET EKGALCREIE EELHVQLTEE DLEYYTHITA PAFGEKRGVI MEQDCYLVHR DIEPKPAAEI GEIRFFSSDE YAEQSAQAPG AIAILKILQE AGLVD
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