Gene Cpin_5229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5229 
Symbol 
ID8361406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6608772 
End bp6609179 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content48% 
IMG OID644967377 
ProductNUDIX hydrolase 
Protein accessionYP_003124861 
Protein GI256424208 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.354161 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.044426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGCAT TAAAGACCGT AGGGCTCCTG GTAGTCCGGG ACAGGAAATT ATTACTGGCA 
TTCAGCAGAA ATAAACAATG TTTTTATTTA CCCGGCGGCA AAGTAGATGA AGGGGAGACG
GAGAAGGGCG CGCTTTGCCG GGAGATCGAA GAAGAGCTGC ATGTGCAGCT GACAGAAGAA
GACCTTGAAT ACTATACACA TATCACAGCG CCTGCTTTTG GCGAAAAGAG AGGCGTGATT
ATGGAACAGG ACTGTTACCT GGTACACCGG GACATTGAGC CGAAACCGGC TGCTGAAATA
GGAGAGATCC GTTTCTTTTC TTCGGATGAA TATGCAGAAC AGTCTGCACA AGCCCCGGGG
GCAATCGCTA TTCTGAAAAT ATTACAGGAA GCGGGATTAG TTGATTAA
 
Protein sequence
MVALKTVGLL VVRDRKLLLA FSRNKQCFYL PGGKVDEGET EKGALCREIE EELHVQLTEE 
DLEYYTHITA PAFGEKRGVI MEQDCYLVHR DIEPKPAAEI GEIRFFSSDE YAEQSAQAPG
AIAILKILQE AGLVD