| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5218 |
|---|
| Symbol | |
|---|
| ID | 8361395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 6593437 |
|---|
| End bp | 6594381 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644967366 |
|---|
| Product | alpha/beta hydrolase fold protein |
|---|
| Protein accession | YP_003124850 |
|---|
| Protein GI | 256424197 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.506576 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATTA CAACACGGTT TACTACTATG GGCATGCTGG CTTTATCCGC ATTACTGACA
TTTGGTTTTG CATCCTGCGA TAAGGATGAA GATACAACGA CGCCAACAGC TTCTTATGAT
CACCAACATG CGCCAACGCA GTTTGTGGCT GCAGGTGATA CCAAATTTGC TTACCGTATA
CTGGGTAATA ACGAAGGCGT ACCGCTGGTG GTACTTGCTC CACTGGGTAG TACTATGGAC
GACTGGGATC CGGCTGTTAC AGATGGCTTT GCGAAGAAAT ACAAAGTGAT CTTATTTGAT
AATGCAGGTG TGGGCTCCTC AACAGGTAAG ACGCCTTCCA CGATAGCAGA TATGGCGAAA
GGCGCAGTCA CCTTCATCAA AGCAATGGGT TATAGCAGGG TGAATCTGCT GGCCTTTTCA
ATGGGTTCGT TTGTGGCACA GCAGATCGCA CTGACAGAAC CGGCATTGAT CAACAAGATG
GTACTGACAG GTGTGGGGCC GAAAGGTAGC GAAGGCTTGT CTAAACTGCC TGAAATCATT
GGCGGCGGCC AGGGACTGAG TGCAGAAGAG TCCTTTTTAT ACTTCGGTTT CACTAAATCT
GAAGCCAGCC GTGCCGCGGG AAAACTGTCG TATGCAAGGA TACAGCTCCG CCAGGTAGAT
CGTGACAAAC CGCTCAGCGA TGAAAGCAGT CTCGCCGAAC TGACAGCTGT ACTGGGTTGG
GCACAACCTG CACCGGATGC ACTCAAGGAA CTGGAATCCG TGAAGATACC AGTACTGCTG
ATACAGGGTA AAGAAGACCT TCCAGTACCT GTCATCAATC CGACCAATAT GGCACAACAT
CTGCCGAATG CACGCCTGAT CGTATATGAA GACGCGGCAC ATGCTTCCTT ATTCCAGCTG
GCGGATAAGT TTGTAAAAGA CGGAAGTGAT TTCCTGGGAG AATAA
|
|---|
| Protein sequence | MAITTRFTTM GMLALSALLT FGFASCDKDE DTTTPTASYD HQHAPTQFVA AGDTKFAYRI
LGNNEGVPLV VLAPLGSTMD DWDPAVTDGF AKKYKVILFD NAGVGSSTGK TPSTIADMAK
GAVTFIKAMG YSRVNLLAFS MGSFVAQQIA LTEPALINKM VLTGVGPKGS EGLSKLPEII
GGGQGLSAEE SFLYFGFTKS EASRAAGKLS YARIQLRQVD RDKPLSDESS LAELTAVLGW
AQPAPDALKE LESVKIPVLL IQGKEDLPVP VINPTNMAQH LPNARLIVYE DAAHASLFQL
ADKFVKDGSD FLGE
|
|---|
| |