| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5162 |
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| Symbol | |
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| ID | 8361339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6442567 |
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| End bp | 6443637 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644967311 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_003124795 |
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| Protein GI | 256424142 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.575675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000379342 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTATAA AAGACCTTAA CATACTGGCG CCGGTCAGGA AACATTGGCG GCAGATATTG
ATCATCCTGG CAATCTATAC GACCTGGAGT GTAGCGGTAT TCCTTTTTCT GATCGGACTA
CAGGGGCCCG AAACGACCAT CAAACAATTT GGCGGCAGCC AGGCTGTTTA TTTCAATTTT
GGTCATGCAA TCATCAAGGG AACGATCGTT TATTATATTC TGATCTATCA CCTGGCGCTG
CCATTGGTAC AGACCAGGAA ATGGAAAAGA GCATTGTTAA AGTGTATACT GTTTCTGATA
TTACTGACAG TCTATGAGTA CTGCTGGCAC TTCAAAAAAA TTGATCCCGC CATCGGAGAA
AACGTACATA TTTCGCCGCA TACTTTTCTG GTTACTACGG TCATCCTTGA TGTCATTATG
GTGATGGTAT CGATTTATTT TGCCACCCTC ATAACGTCCA ATGAAGTGCA CCGGCGAAAG
GAGGAACTGG AGAAGCAAAA ACTGCAGGCA GAGCTTTCTG CTATCAGGTA TCAGATCAAT
CCGCATTTCC TGTTTAACTC GCTCAGCTTT ATTTATACAA AGACACTGAA GACGAGTCCG
GAAGCCGCAC ACGCCGTACA CCTCTTATCA GAGATCATGA GTTATGCACT GGACGACTGG
GGAGAGCTGG GTACCGTACC GCTCACGCTG GAAGTGGATC ACATGAAGAA GGTGATAGAA
ATGAACCAGA TCCGGTTTAA TCACATGCTC AAGATCAAAT ACCAGGAGCA TGTAGAAGAG
AGCGAAATGC ATGTGCCGAC TCTGGCCCTT GTGACATTGG TAGAGAACGC GTTCAAACAC
GGTGATCTGA ATGATGAACA GAACCAGGTG AGTTTTGAAT TAAACGCAAC AAAAAACCGT
ATCTCTTTTA AGGTGAGCAA CAAGAAGAAA AAAGGCCCGA AAGAACCCTC CAAGGGTATC
GGACTAAGCA ATGTACAGCA ACGCTTACAG CTTATGTATG GTGCGAAGCA GTCATTTGTG
ATTGAAGAAG ACGAAAACTA TTATTCAAAC GAGATAATCA TTAACCTGTA A
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| Protein sequence | MSIKDLNILA PVRKHWRQIL IILAIYTTWS VAVFLFLIGL QGPETTIKQF GGSQAVYFNF
GHAIIKGTIV YYILIYHLAL PLVQTRKWKR ALLKCILFLI LLTVYEYCWH FKKIDPAIGE
NVHISPHTFL VTTVILDVIM VMVSIYFATL ITSNEVHRRK EELEKQKLQA ELSAIRYQIN
PHFLFNSLSF IYTKTLKTSP EAAHAVHLLS EIMSYALDDW GELGTVPLTL EVDHMKKVIE
MNQIRFNHML KIKYQEHVEE SEMHVPTLAL VTLVENAFKH GDLNDEQNQV SFELNATKNR
ISFKVSNKKK KGPKEPSKGI GLSNVQQRLQ LMYGAKQSFV IEEDENYYSN EIIINL
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