| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5161 |
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| Symbol | |
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| ID | 8361338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6441817 |
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| End bp | 6442563 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644967310 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003124794 |
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| Protein GI | 256424141 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.185153 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000735465 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCAATT GTATTGTCGT AGATGACGAA GCACATGCAA TAGAATTGCT GACACTGCAT
ATTGAGCAGA CATCGTTTCT GAAGCTGGCA GGTACCGCGA CCAATCCTGT GGAAGCCTTG
CAGTTGTTGC ATCAGACAGA GATGGACCTC ATCTTCCTTG ATATCCAGAT GCCGGGTATG
TCAGGGATAG AGCTGCTGCA ATTGCTGAAC GAAAAATATA AGGTGATATT GACGACAGCT
TTCAGAGAAT ATGCGCTGGA TGGATATGAT CATAATGTGG TGGATTACCT GCTAAAACCC
ATTTTCTTTC CGCGGTTTCT GAAAGCGGTA CAACGGGCAC AGGAAGCAAT CGCATCACCC
AAAAAAGAAA CGGATGATTT TATACTGGTC AAAACCGAGT ATAAGGGAAA GCTCTTGAAG
ATAAATGTGA ACGACATCAT TTACATCGAA GGAAAAGGAC GGTATGTCTG TTTTCATACC
CGTGACAAAG AGCAGGTGAT GGCACAGCTG AATATCGGCA GCCTTGAAGG GAAGCTACCT
GGGGACCGCT TTCTGCGGAT CCATAAATCT TTCATCATCG CTATCCCTTT TATCATCATG
ATTCATGGGA ATATGGTTCA CCTGGAATTT ACAGAAGATC AGATTCCCAT CGGACAAACA
TACCGTGATG TGTTTATGGG GCAGATGCTG GACAAGGTGA TCACTAATAA AAACAAAGAA
GACGCAGACC CGGGAGCGTC TGTTTAA
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| Protein sequence | MINCIVVDDE AHAIELLTLH IEQTSFLKLA GTATNPVEAL QLLHQTEMDL IFLDIQMPGM
SGIELLQLLN EKYKVILTTA FREYALDGYD HNVVDYLLKP IFFPRFLKAV QRAQEAIASP
KKETDDFILV KTEYKGKLLK INVNDIIYIE GKGRYVCFHT RDKEQVMAQL NIGSLEGKLP
GDRFLRIHKS FIIAIPFIIM IHGNMVHLEF TEDQIPIGQT YRDVFMGQML DKVITNKNKE
DADPGASV
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