Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5152 |
Symbol | |
ID | 8361329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6431797 |
End bp | 6432627 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644967301 |
Product | hypothetical protein |
Protein accession | YP_003124785 |
Protein GI | 256424132 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.158632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00137129 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAACACCA CAGCCGTCGC GGGAGATTAT GCCCGGTCTA TAGTTGCAAC GGAACCGTCC GTTCCGGAAG CAGCCACTGC CTTCTGTCGT TTCGACGACC AGGAACGGGC GTTAGCGATG GCAGACGGGC TGGTATTCCA CCTGGACGAT ACGATTCATC CCCTTTGTAA AATGGCCGCT GCCGCACTAC AGGAACACCT TCAGCAGCAA AATGAATGGA CACATAATTT CGGCCTGAAC AATGCCGGGA ACGGTGCGGT GATCGGTAAG ATGTTTGGCG TACTGGTGGT AAGGAATAAG CACGGAGCCG TAGGGTATCT TTCTGCATTC TCCGGAAAGC TGGCCAACGG AAATCATCAT AATAAGTTTG TCGACCCTGT ATTTGATGGT ATGAAAGAAG GAGGGTTTCT CAATGCAGGT ATGAGCCGCC TGACAGCAAT CAACAGTGAA ATAGCTGCCC TGATGGTGAC AGATGCTACG GGTAATCAGT CAGAGATCAC TCGTTTGAAG GAGTTGCGTA AAACGCATTC CATCGCTTTG CAACGCCGGA TTTTTGAGGA ATATAATTTC AGGAATAAAG CAGGTCGTTT TAAGAACCTG GTAGACATTT TTACTACCCA GGGCTATAAA CAGCCGCCTG CCGGGGCAGG AGAGTGTGCC GGTCCGAAAC TGCTGCAATA TGCTTTTTAT CATCAGCTGG AACCGCTGGC TTTAGCGGAA TTCTGGTGGG GCTTATCCCC CAAATCTGCT ACCTGGAAAC ACGGAGAATT TTACCAACCC TGTAAAGAGA AATGTGCCCC CATTCTGGCG CATATGCTTA GCGAAAAATA G
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Protein sequence | MNTTAVAGDY ARSIVATEPS VPEAATAFCR FDDQERALAM ADGLVFHLDD TIHPLCKMAA AALQEHLQQQ NEWTHNFGLN NAGNGAVIGK MFGVLVVRNK HGAVGYLSAF SGKLANGNHH NKFVDPVFDG MKEGGFLNAG MSRLTAINSE IAALMVTDAT GNQSEITRLK ELRKTHSIAL QRRIFEEYNF RNKAGRFKNL VDIFTTQGYK QPPAGAGECA GPKLLQYAFY HQLEPLALAE FWWGLSPKSA TWKHGEFYQP CKEKCAPILA HMLSEK
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