Gene Cpin_5152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5152 
Symbol 
ID8361329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6431797 
End bp6432627 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content50% 
IMG OID644967301 
Producthypothetical protein 
Protein accessionYP_003124785 
Protein GI256424132 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.158632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00137129 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAACACCA CAGCCGTCGC GGGAGATTAT GCCCGGTCTA TAGTTGCAAC GGAACCGTCC 
GTTCCGGAAG CAGCCACTGC CTTCTGTCGT TTCGACGACC AGGAACGGGC GTTAGCGATG
GCAGACGGGC TGGTATTCCA CCTGGACGAT ACGATTCATC CCCTTTGTAA AATGGCCGCT
GCCGCACTAC AGGAACACCT TCAGCAGCAA AATGAATGGA CACATAATTT CGGCCTGAAC
AATGCCGGGA ACGGTGCGGT GATCGGTAAG ATGTTTGGCG TACTGGTGGT AAGGAATAAG
CACGGAGCCG TAGGGTATCT TTCTGCATTC TCCGGAAAGC TGGCCAACGG AAATCATCAT
AATAAGTTTG TCGACCCTGT ATTTGATGGT ATGAAAGAAG GAGGGTTTCT CAATGCAGGT
ATGAGCCGCC TGACAGCAAT CAACAGTGAA ATAGCTGCCC TGATGGTGAC AGATGCTACG
GGTAATCAGT CAGAGATCAC TCGTTTGAAG GAGTTGCGTA AAACGCATTC CATCGCTTTG
CAACGCCGGA TTTTTGAGGA ATATAATTTC AGGAATAAAG CAGGTCGTTT TAAGAACCTG
GTAGACATTT TTACTACCCA GGGCTATAAA CAGCCGCCTG CCGGGGCAGG AGAGTGTGCC
GGTCCGAAAC TGCTGCAATA TGCTTTTTAT CATCAGCTGG AACCGCTGGC TTTAGCGGAA
TTCTGGTGGG GCTTATCCCC CAAATCTGCT ACCTGGAAAC ACGGAGAATT TTACCAACCC
TGTAAAGAGA AATGTGCCCC CATTCTGGCG CATATGCTTA GCGAAAAATA G
 
Protein sequence
MNTTAVAGDY ARSIVATEPS VPEAATAFCR FDDQERALAM ADGLVFHLDD TIHPLCKMAA 
AALQEHLQQQ NEWTHNFGLN NAGNGAVIGK MFGVLVVRNK HGAVGYLSAF SGKLANGNHH
NKFVDPVFDG MKEGGFLNAG MSRLTAINSE IAALMVTDAT GNQSEITRLK ELRKTHSIAL
QRRIFEEYNF RNKAGRFKNL VDIFTTQGYK QPPAGAGECA GPKLLQYAFY HQLEPLALAE
FWWGLSPKSA TWKHGEFYQP CKEKCAPILA HMLSEK