| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5147 |
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| Symbol | |
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| ID | 8361324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6423207 |
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| End bp | 6426701 |
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| Gene Length | 3495 bp |
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| Protein Length | 1164 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967296 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003124780 |
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| Protein GI | 256424127 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0557034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0156539 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTTA CTGCTTATCC CAAGCCGTAC CTGAAAGCTA TGCCTGTTCA GGAACCTGCG
GCCCGGGGCT TATCAACCAA ATCGCTGTCG ATGGACGACC TGATAGTCAA GCCAGGTCGC
CAGTACCGGA CAGCCACAAT ATTTCTTGCT ATGAAATTGA CATTCATGCT GCTTTTTGTA
GCACTTATTC ATGTCAGGGC TTCCGTGGAA GCACAAACAG TGTCAGTGTC CGGCAACAAT
ATGTCCGTTA AAGCACTCCT GCAAACCATT CGTCAGCAAA CCGGCTACGT GGCATTCTAC
AACCAGGATA TGCTCACCAA TGCTAAAACG GTCTCTGTTA AAGGCAATAT CGCCCTGCCT
GAACTGATCA GCATTATGTC CAGAGATCAG CCCTTTCGTA TGGAGCTGAA AGAAAACACA
AAAACAATTG TCATCACGCC AAAGCCTGTT CCTGCTGAGT TGACAATGGA AAAGGTGAGT
GCAGCACCTG GGAAAATTCT CGGACATGTG GCAGACAGCG TATGTAATTG TCCCCTGCCG
GGAGCTACCA TCCGGGTGAA AGGTAAAACA GCCACCACCT CCACTGATGC GCAGGGTAAT
TTTACCATTG AAGCTGAACA GGGCGATGTA TTGCTGATTT CCTTTGTCGG ATACCGGCCT
ACAGCTTATA CTGTGCGCAG GGATAAAAGC ATCTCCATCA TCATGGCGCC TGCTGTATCT
TCTATCAACA ATGTGGTAGT AACGGGTATC TTCAACAAGG CAAAAGAGTC TTACACAGGT
GCTGCCAAGA CGATTACAGC CAAAGAGATC CAGAACTTTC AGGGCAGAAA TATCTTTGTC
ACCATTGGCA ACATCGATCC GTCTTTTTAC ATCGTTCCCA ATAACAGCTT CGGCTCTGAT
CCGAACCATC TGCCTGATAT CCAGATGAGA GGAAACAGGA ACCTGCCTAA TATCGATCAG
CTGCAGGATA ACACGTCTGC ACTTATCAAT ACACCACTCA TCATCATGGA TGGTTTCCCG
ATCACCCTGC AACGTATGAT GGACCTCAAC ACCAATGAAA TAGCCTCCAT TACTTTGCTG
AAAGACGGTC CGGCGACTGC TATCTATGGT TCCAGAGGCG CTAACGGGGT CATTGTGATC
ACTACTAAAG AACCCGTACC TGGTAAGCTG CGCCTCACTT ACAGAGGAGG CTTGAGTCTG
AGTGCGCCTG ATCTCAGTTC CTATCACCTG TTGAATGCAC GCGATAAACT GGAACTGGAG
AGATTGTCTG GTTTTTATTA TAACTCGACG AAAAGCCCTG AACAGAATAT CAGTCTGCAG
CAATACTATA ACCAGGTTAA AGCACAGGTC GAAAGTGGTG TAAATACTGA CTGGATGGCA
AAACCTTTAC GTAATGGTGT AGACCAGCAG CACTCCCTCC GCCTGGAAGG TGGAGACGCC
GCCTTCCGTT ATGCCCTGAT CGGTGATGTA CATAAGATCA ATGGTGTCAT GAAAGGATCC
GACAGAAGAA CGATTAACGG AACCGCAGAC CTCTCTTATC GTCTTAAAAC GTTGAATTTC
CGCAATAGTC TGACAGTAGG CAGCGTGAAT GCGAATGAGT CTCCATGGGG TGTTTTCGGT
GATTATGTGA AACTGAACCC ATACTGGAGT CCTTACGATG CTGCCGGCAA TATCGTGAAA
ACATTTACGC CGTTTAACTA TGACTACTGG GTACAAAACA ATGGCACAGG CGGAAAACCT
TACCCTAACC CGATGTATGA CGCTACACTG AATACATTCA ACAGCAGTCA GTATCTCAAT
ATCATCAACA ATTTCCAGGT TGACTGGTCG CCATTCAAAC ACTTCACCGT AAGAGGTGCT
TTTGGTATCA ATGCGACCAA TCTCAACTCC GATATATTCA AGCCTGCAGA ACATTCTGCT
TTCGCAGGTT ACAGCGATGC AGACATCCTG CGTAAAGGTT CTTACGACTA TGGCACCGGT
AAGTCATTCA GTTACACCAG TAACCTGAAT CTCCAGTATA GTAATCTCTT CAGAGGACTG
CACTATCTGA GTATCGGGGC GCAGCTGGAA GCAGCTGAAG ATAAAAGCAC TAACTACAGT
TTTTCTGCAG AAGGCTTCCC TGATGCCAGC ATCGATTTCC TTGGTATGGC ATTGCAGTAT
CAGCGGGATG GCCGTCCGGG CGGTACAGAA GCCACTACCA GAAGGGTGAG TGCCATAGGT
AACGTGAGCT ATAGCTATGA TGACCGCTAC TTTGCAGACG TGAGCTATCG TTTAGATGGC
GCCTCTCAGT TTGGTACGAA CAGTCGCTTT GCACCATTCT ATTCTTTAGG AGCCGGTTGG
AACCTGCATC ATATAGATTT TATACATGAT AATCTGCCGG TTGTAAACAG GCTGAAAATC
CGTGGTTCAT ATGGTGTGAC GGGTAACCAG GCATTTTCTG CTTATCAGCC TTTGGCCACC
TATGGGTATA TTATCAATGA CCACTATAAG AACTGGCTGG GTGCCAGACA AACTTCATTG
GGCAATCCTG ATCTGCAATG GCAGAAAAAC CAGAAATACA ATGCAGGGGT AGAAGCGGAC
TTATTTCGTG GAAGGATTAC CATGCAGGCC GATTTCTACA AAGAAAAGAC CTCTAATCTC
TTATCCTCAC TGGAGTTGCC TTATTCCAAC GGATTCACCA GCTACATTGA AAATATCGGA
CAGCTGGAAC AAACAGGATG GCAGGCCAGT GCTACATTGA TGCTGATACA GGATGACGCA
CGTCGTATCA ACTGGTCTGT AACCGGTAAC ATTACACATA ATACAGACAG GATCGTACAG
CTGTCACAAG CAATGAAAGC CGCTAACGAG AAACTGGCAT TGCTTACCGA TGGTAGCACA
CCGAATAAAA TTATCCGAGA AGGCGCATCA CAGAATACCA TTTATGCTGT TCGTTCAATG
GGTATAGACC CTAGTACCGG CCGTGAATTA TTCATGACAC GTAAGGGCGA AGTTTCTTAC
TCCTGGAATG CGGCAGACAG GGTAGCAGTG GGATTAAATC AGCCTACCTA TCGCGGTAAC
TTCAGTACGC TGGTGCGTTA CCAGGGGCTT TCCTTTAACG CATCCTTCGG CTATCGCCTG
GGCGGACAGA TATACAATCA GACCCTGGTA GATCGCGTGG AAAGTGCGGA TAAGTTCTTT
AACGTAGATG CCCGCGTATT TACAGATCGC TGGAAACAAC CCGGAGATAA GGCGTTTTTC
AGAGGCATCA ATGACTATTC TGTCATCTTT CCTTCTTCAA GATTTGTGCA GAATGAATCA
ACACTCACCT GTCAGAACAT CAACATTACC TATAATGTGC TGAACAGAGC CTGGTTGCAA
CATGCAGGTC TGCAGGCATT GACGCTTTCC GCTAATACAG GAGAACTGTT CTACCTGTCT
ACGGTAAAGC AGGAGAGAGG ACTGGATTAT CCGTTCACAA GGCAGGTTTC ATTTAATGTA
TTTGTCACTT TCTAA
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| Protein sequence | MDFTAYPKPY LKAMPVQEPA ARGLSTKSLS MDDLIVKPGR QYRTATIFLA MKLTFMLLFV
ALIHVRASVE AQTVSVSGNN MSVKALLQTI RQQTGYVAFY NQDMLTNAKT VSVKGNIALP
ELISIMSRDQ PFRMELKENT KTIVITPKPV PAELTMEKVS AAPGKILGHV ADSVCNCPLP
GATIRVKGKT ATTSTDAQGN FTIEAEQGDV LLISFVGYRP TAYTVRRDKS ISIIMAPAVS
SINNVVVTGI FNKAKESYTG AAKTITAKEI QNFQGRNIFV TIGNIDPSFY IVPNNSFGSD
PNHLPDIQMR GNRNLPNIDQ LQDNTSALIN TPLIIMDGFP ITLQRMMDLN TNEIASITLL
KDGPATAIYG SRGANGVIVI TTKEPVPGKL RLTYRGGLSL SAPDLSSYHL LNARDKLELE
RLSGFYYNST KSPEQNISLQ QYYNQVKAQV ESGVNTDWMA KPLRNGVDQQ HSLRLEGGDA
AFRYALIGDV HKINGVMKGS DRRTINGTAD LSYRLKTLNF RNSLTVGSVN ANESPWGVFG
DYVKLNPYWS PYDAAGNIVK TFTPFNYDYW VQNNGTGGKP YPNPMYDATL NTFNSSQYLN
IINNFQVDWS PFKHFTVRGA FGINATNLNS DIFKPAEHSA FAGYSDADIL RKGSYDYGTG
KSFSYTSNLN LQYSNLFRGL HYLSIGAQLE AAEDKSTNYS FSAEGFPDAS IDFLGMALQY
QRDGRPGGTE ATTRRVSAIG NVSYSYDDRY FADVSYRLDG ASQFGTNSRF APFYSLGAGW
NLHHIDFIHD NLPVVNRLKI RGSYGVTGNQ AFSAYQPLAT YGYIINDHYK NWLGARQTSL
GNPDLQWQKN QKYNAGVEAD LFRGRITMQA DFYKEKTSNL LSSLELPYSN GFTSYIENIG
QLEQTGWQAS ATLMLIQDDA RRINWSVTGN ITHNTDRIVQ LSQAMKAANE KLALLTDGST
PNKIIREGAS QNTIYAVRSM GIDPSTGREL FMTRKGEVSY SWNAADRVAV GLNQPTYRGN
FSTLVRYQGL SFNASFGYRL GGQIYNQTLV DRVESADKFF NVDARVFTDR WKQPGDKAFF
RGINDYSVIF PSSRFVQNES TLTCQNINIT YNVLNRAWLQ HAGLQALTLS ANTGELFYLS
TVKQERGLDY PFTRQVSFNV FVTF
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