Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5146 |
Symbol | |
ID | 8361323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6421692 |
End bp | 6423194 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644967295 |
Product | hypothetical protein |
Protein accession | YP_003124779 |
Protein GI | 256424126 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000128117 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00789925 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGAAAC TAATATCAAC AACTATACTA TTTAGCGCGC TGGCTTTCAG CAGCTGTAAT AAATACCTTG ACGTTACACC TCAGGCACAG ACCACCAAAG ATCAGATATT CAGCACAGAA AAGGGCTTCC GTGATGCGCT GACCGGCGCT TATATTCAGA TGAAAAGTAA CAATACCTAC GGTGGTAGTC TGATGTGGGG GAATATTGAA TTCATGGCCC GTAACTGGGA TGTGGTATCT GCGAATAACG TCGCATTGAA CAGCCTCGCC AACGCTAATT ATACGGATGC GGTTGTAAGA AGCTGGCTAG ATAATACTTA TGCGGATCTC TATAAGGTAG TGGCCAGTGT AAACAGTATC CTGGAAAGAA TTGACGCACA AAAGGGCATG TTTACCGGTA ACAACTATTC CCTGATTAAA GGAGAAGCCC TGGCTTTACG TGCGTTTAAC CACTTTGATG TGTTGCGCAT GTATGGTCCT ATGCCTGACA ACCCTGGTCA GGGCCCCTTG CTGCCTTATG TGAGAGAAGT GACGCATGAG GTCATCACGC CTGTCGGTTA TGCTGAATTT GCACAGCATA TCCTTTCAGA CCTGGATGCA GCAGAAGCAT TGATGAAGGA TACGGATCCC ATCAGGACCT ATTCGCTGGC AGAATTAAAT CCGCCTACGA ATATCAATAC GCCTCCGGTA GTAGCAGACA ACTTTTACAT GTACCGTCAG ATAAGGCTGA ACTACTATGC AGTGCTGGCC TTGAAAGCAA GGGTATATAT GTATCTCTCT ACAACCGATC CTGCCAACAA AGTCAATGCA GCAAAATATG CGCAGATGGT AGTTGACGCG AGAGACCATT CTGGTTTACC AATTTTCCGA CTTGGCAGGG AGAGTGATCG CGTATCCGGA GACTATCTCA TGTCTTCAGA ACATATTGCA GCCCTGAGCG TATACAACCT GGATGCTATT GCCTCCGGTA CATTCGGCGA ACTTGGTTCG CTGGCCCGTA GTGACTTTAA CGTACAGGAC GGCTTTTACT TTCTTAATAA TCTCTTCCCT GTTGCAGAAA GAACTTCTGA TGTAAGATGG AAAGAAATGT GGGTGTACAG GGTCAACAAC CCTAGTTACG TGATGTACAG GAAGTTTAAT CAGCGGGCGT CTAATCCTGT CTTACAGGTG CCTTTATTAC GTCTTAGCGA AATGTATCTG ATACTCACAG AATGCGCTGC CGGAAAAGAG GATGCAGAGG CTGCCTATGG GGCTTATTGT AACGAAAAGG GTATTCCTTT CCCTACAGGC TTCAATGCCT CCGGTTGGGA AGCAGACCGC AGGAATAAGA TCATCCGTGA ATATGTACGT GAACTTTATG CGGAAGGGCA GACTTTCTTC ACCTATAAAA GGCTGAACGT AAACACCCTT CCTGCCAGCT GGACGGCTGC TTATTATACC GGCACTGCCG CCAGGTATGT CGTACCAAAA CCGGATCGCG AAATTAATTA TCACAACAAC TAA
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Protein sequence | MKKLISTTIL FSALAFSSCN KYLDVTPQAQ TTKDQIFSTE KGFRDALTGA YIQMKSNNTY GGSLMWGNIE FMARNWDVVS ANNVALNSLA NANYTDAVVR SWLDNTYADL YKVVASVNSI LERIDAQKGM FTGNNYSLIK GEALALRAFN HFDVLRMYGP MPDNPGQGPL LPYVREVTHE VITPVGYAEF AQHILSDLDA AEALMKDTDP IRTYSLAELN PPTNINTPPV VADNFYMYRQ IRLNYYAVLA LKARVYMYLS TTDPANKVNA AKYAQMVVDA RDHSGLPIFR LGRESDRVSG DYLMSSEHIA ALSVYNLDAI ASGTFGELGS LARSDFNVQD GFYFLNNLFP VAERTSDVRW KEMWVYRVNN PSYVMYRKFN QRASNPVLQV PLLRLSEMYL ILTECAAGKE DAEAAYGAYC NEKGIPFPTG FNASGWEADR RNKIIREYVR ELYAEGQTFF TYKRLNVNTL PASWTAAYYT GTAARYVVPK PDREINYHNN
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