Gene Cpin_5146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5146 
Symbol 
ID8361323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6421692 
End bp6423194 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content46% 
IMG OID644967295 
Producthypothetical protein 
Protein accessionYP_003124779 
Protein GI256424126 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000128117 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00789925 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGAAAC TAATATCAAC AACTATACTA TTTAGCGCGC TGGCTTTCAG CAGCTGTAAT 
AAATACCTTG ACGTTACACC TCAGGCACAG ACCACCAAAG ATCAGATATT CAGCACAGAA
AAGGGCTTCC GTGATGCGCT GACCGGCGCT TATATTCAGA TGAAAAGTAA CAATACCTAC
GGTGGTAGTC TGATGTGGGG GAATATTGAA TTCATGGCCC GTAACTGGGA TGTGGTATCT
GCGAATAACG TCGCATTGAA CAGCCTCGCC AACGCTAATT ATACGGATGC GGTTGTAAGA
AGCTGGCTAG ATAATACTTA TGCGGATCTC TATAAGGTAG TGGCCAGTGT AAACAGTATC
CTGGAAAGAA TTGACGCACA AAAGGGCATG TTTACCGGTA ACAACTATTC CCTGATTAAA
GGAGAAGCCC TGGCTTTACG TGCGTTTAAC CACTTTGATG TGTTGCGCAT GTATGGTCCT
ATGCCTGACA ACCCTGGTCA GGGCCCCTTG CTGCCTTATG TGAGAGAAGT GACGCATGAG
GTCATCACGC CTGTCGGTTA TGCTGAATTT GCACAGCATA TCCTTTCAGA CCTGGATGCA
GCAGAAGCAT TGATGAAGGA TACGGATCCC ATCAGGACCT ATTCGCTGGC AGAATTAAAT
CCGCCTACGA ATATCAATAC GCCTCCGGTA GTAGCAGACA ACTTTTACAT GTACCGTCAG
ATAAGGCTGA ACTACTATGC AGTGCTGGCC TTGAAAGCAA GGGTATATAT GTATCTCTCT
ACAACCGATC CTGCCAACAA AGTCAATGCA GCAAAATATG CGCAGATGGT AGTTGACGCG
AGAGACCATT CTGGTTTACC AATTTTCCGA CTTGGCAGGG AGAGTGATCG CGTATCCGGA
GACTATCTCA TGTCTTCAGA ACATATTGCA GCCCTGAGCG TATACAACCT GGATGCTATT
GCCTCCGGTA CATTCGGCGA ACTTGGTTCG CTGGCCCGTA GTGACTTTAA CGTACAGGAC
GGCTTTTACT TTCTTAATAA TCTCTTCCCT GTTGCAGAAA GAACTTCTGA TGTAAGATGG
AAAGAAATGT GGGTGTACAG GGTCAACAAC CCTAGTTACG TGATGTACAG GAAGTTTAAT
CAGCGGGCGT CTAATCCTGT CTTACAGGTG CCTTTATTAC GTCTTAGCGA AATGTATCTG
ATACTCACAG AATGCGCTGC CGGAAAAGAG GATGCAGAGG CTGCCTATGG GGCTTATTGT
AACGAAAAGG GTATTCCTTT CCCTACAGGC TTCAATGCCT CCGGTTGGGA AGCAGACCGC
AGGAATAAGA TCATCCGTGA ATATGTACGT GAACTTTATG CGGAAGGGCA GACTTTCTTC
ACCTATAAAA GGCTGAACGT AAACACCCTT CCTGCCAGCT GGACGGCTGC TTATTATACC
GGCACTGCCG CCAGGTATGT CGTACCAAAA CCGGATCGCG AAATTAATTA TCACAACAAC
TAA
 
Protein sequence
MKKLISTTIL FSALAFSSCN KYLDVTPQAQ TTKDQIFSTE KGFRDALTGA YIQMKSNNTY 
GGSLMWGNIE FMARNWDVVS ANNVALNSLA NANYTDAVVR SWLDNTYADL YKVVASVNSI
LERIDAQKGM FTGNNYSLIK GEALALRAFN HFDVLRMYGP MPDNPGQGPL LPYVREVTHE
VITPVGYAEF AQHILSDLDA AEALMKDTDP IRTYSLAELN PPTNINTPPV VADNFYMYRQ
IRLNYYAVLA LKARVYMYLS TTDPANKVNA AKYAQMVVDA RDHSGLPIFR LGRESDRVSG
DYLMSSEHIA ALSVYNLDAI ASGTFGELGS LARSDFNVQD GFYFLNNLFP VAERTSDVRW
KEMWVYRVNN PSYVMYRKFN QRASNPVLQV PLLRLSEMYL ILTECAAGKE DAEAAYGAYC
NEKGIPFPTG FNASGWEADR RNKIIREYVR ELYAEGQTFF TYKRLNVNTL PASWTAAYYT
GTAARYVVPK PDREINYHNN