Gene Cpin_5131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5131 
Symbol 
ID8361308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6404666 
End bp6405043 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content42% 
IMG OID644967280 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003124764 
Protein GI256424111 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0956366 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.235138 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAAG AGCTTTGTCC CAAAAGAGAC ATCATGGCGA TCCATGACGC GATGGATGTA 
CTGAACGGAA AATGGAAAAT TTCCATTATT TCGTCTATGT GTTACTATAA CGAGCGAAGG
TTTTCCGATA TACTGAATGA CCTTCACGGT ATTTCCAACA AACAGCTAAG TAAAGAGCTG
AAGGATCTGG AAGAAAATAA ACTGGTCAGG CGTACTGTAT TAGATACCCA ACCCGTTTCT
GTTAAATACA ACCTCACTGA ATATGGCTGG TCGCTACAGA ATCTCATTTA CGACCTTTCC
GATTGGGGTA AAAAACACAG GGAAGTCATT GTACGCGACT GGCAAGACAA TACTCAAAAC
AAGCCCACTC AGCCATAA
 
Protein sequence
MTEELCPKRD IMAIHDAMDV LNGKWKISII SSMCYYNERR FSDILNDLHG ISNKQLSKEL 
KDLEENKLVR RTVLDTQPVS VKYNLTEYGW SLQNLIYDLS DWGKKHREVI VRDWQDNTQN
KPTQP