Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5131 |
Symbol | |
ID | 8361308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6404666 |
End bp | 6405043 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644967280 |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003124764 |
Protein GI | 256424111 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0956366 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.235138 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAAG AGCTTTGTCC CAAAAGAGAC ATCATGGCGA TCCATGACGC GATGGATGTA CTGAACGGAA AATGGAAAAT TTCCATTATT TCGTCTATGT GTTACTATAA CGAGCGAAGG TTTTCCGATA TACTGAATGA CCTTCACGGT ATTTCCAACA AACAGCTAAG TAAAGAGCTG AAGGATCTGG AAGAAAATAA ACTGGTCAGG CGTACTGTAT TAGATACCCA ACCCGTTTCT GTTAAATACA ACCTCACTGA ATATGGCTGG TCGCTACAGA ATCTCATTTA CGACCTTTCC GATTGGGGTA AAAAACACAG GGAAGTCATT GTACGCGACT GGCAAGACAA TACTCAAAAC AAGCCCACTC AGCCATAA
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Protein sequence | MTEELCPKRD IMAIHDAMDV LNGKWKISII SSMCYYNERR FSDILNDLHG ISNKQLSKEL KDLEENKLVR RTVLDTQPVS VKYNLTEYGW SLQNLIYDLS DWGKKHREVI VRDWQDNTQN KPTQP
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