| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5117 |
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| Symbol | |
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| ID | 8361293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6388702 |
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| End bp | 6392100 |
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| Gene Length | 3399 bp |
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| Protein Length | 1132 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644967265 |
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| Product | Carbohydrate binding family 6 |
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| Protein accession | YP_003124750 |
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| Protein GI | 256424097 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.17685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA ACCTGCTGCT AACATTTCAT AAGCGGTTCT TTACGGCCTG CTTTGGAATC
GCCCTGCTCG CAGCGAGCAC AGACCGTGCC TACAGCCAGG TGCCTACTGG CTTTACGCTG
AAAAAACTAA CCGACAATTC CATCGTTGAA GCTACTGCAA TGGCACATTC TGCTGATGGC
AGAATATTCA TGGCTGAACG TGGAGGTAAG GTGAAAGTTT ATCAGAATGG AACCGTATCT
ACCGTGTATA CCGCTCAAAC AGTAACCGAT GCAGAACAAG GTTTACTGGG TATCACACTT
CACCCTCAAT TCACCAGTAA TGGTCGTTGT TACATTTTCT ACACCAATAG GGAAATGACA
CGTCATTACC TGGACATCTT GTTTATCAAC CAGGCTAACG GTGTCGACTC TGTCAGAAGA
GTAATGGAAT TTGATCAGAT CATCAACGGC GCGCACAATG GTGGCGCGTT GTTATTCCGC
AGAAACCTGC TGTATGTAGC GATCGGCGAG AGCAATGAAG CGATCGAATC TCCGAAGCTG
ACGACTTACC GTGGTAAGAT CCTTCGTCTG ACAGAAGACG GACAACCAGC TCCGGGCAAT
CCTTATTATG ACACCCCTAA CGCCACCCGT CAGCAGAGAA GTATCTGGGC ACGCGGTATG
AGAAATCCGT GGAGGATGTC TCTGGACCCG GTGTCTCAAA GAATCTTTGT GGTGGATGTA
GGCGGTGACT ATGAAGAAAT TAACGATGTT ACCAATCCTG ATCCTGCCAG AGGATATAAC
TATGGCTGGG ACCAGAATCA CAAAACAGGT TATCAGCCGG ATACCACTAC GACGATCCCT
CCGGTTTATT TTTATGACCA CAGTGAAGAT AAAGGCGGAT GTGCTATCAC ATCAGGTGTG
TTCTTCAATC CTCCTGCTAC CAACTATCCG CCACAGTATC TGAATAAGTT CTTCTTCTCA
GACTGGTGTC GTGACTGGTA CAGGTTTGTG GACATCAATG GTCTGAAGCC TTCTTCTCAG
TTTACCGAGT TCTCAGCGAA GAACTTCACC AGGATCCTGG GTACCAGCGT TGGTATAGAT
GGTAACATTT ATTACATCTC TTATGCGGGA GATGGTAGTC TGTATAGAAT TGAATACAAT
AACAACCAGG CGCCATCTAT CGTCAATCAA CCTGAAAATA AAACCGTTAC AGCGGGAGAC
GCGGTGTCTT TCTCCGTTAC TGCTTCCGGT GGTACGCCAT TATCTTTCCA GTGGCAGAAA
AACGGCGTTA ACATTGCCGG CGCTACTGCT GCTACCTACA GCATTGCACA GACCACACAG
GCTGACTCAG GTCAGTACCG TTGTGTAGTG ACCAATCCGA TCAGCACCAT CAACAGTAAT
TCTGCGAAGC TGACCGTATT GCCATTCAAT GCAAGACCAG TTCCGAAGAT CCTTACACCG
GCAGCTACCC TGACCTGGAA CGTAGGTACC ATCGTTAACT ATTCTGCAAC AGCTACCGAT
GCTGAAGACG GTACCTTACC TGATTCCGCT TACACATGGG AGGCACGTTT CTATCATAAA
GACACCCCTA CCAGTGAGCA CTGGCATCCT GGTCCGACCC TGACGAAAGG CGTAAAAACA
GGCAGCTTCA CTGCTGACAA CCTTGGTGAG TCTTCTCCGA ATATCTGGTT CAGACTGATG
CTGACTGTAA AAGATTCTAA CGGCCGTACC GGCGTAGACT CCGTTGACGT TTATCCAAAC
AAAGTACAGG TTACTGCTGC CAGCAATATT CCTGGTATCA GTCTGGTACT GGGTTCAAAA
GAGGTAACAC CGTTCACCAA AACAATGGTG GTAAACTCCC TGACTACACT GCAGGCAGTT
ACCCCACAGT TGCTCGGCGA CACGACCTAC GATTTCGTGT CATGGGCACA TGGCGGCGAT
GCATTACAGT CCATCCGTGT ACCAGCAAAA GATACCGTTT TCCGTGCTAC CTATAAAGCA
GGTGCTTCCC GTCAGAATCC ATACCCTGAC CCGGCCGTAC CTTCCACTAT CCCAGGTAAA
ATCGAGATCG AAAACTTCGA CTATGGTGGC GAAGGCATTG CCTACCATGA CGAAAGCGCT
GCCAATCAGG GTAATCAATA CCGTACCACT GAAGGCGTAG ACCTCGAAAA CTGCGCTGAA
GGTGGTTTCA ATATCGGTTA TGTCAACAAC GGTGAATGGC TGGAATATAC GGCCAACGTA
ACCGTTACCG GTAAATATAC CTTCTCGGCC CGCATCGCTA ATCCGGGTAC TGCCAAGACC
CTCCACGTAG AAATGGATGG CGTTAACATC ACCGGCACCG TAACAGTACC AACAACCGGT
GGTTTCCAGG CATGGCAGAC CGTTTCAACT ACTACCACAC AGTCACTGCC TGCCGGCATA
CATGTGTTCC GTATTGTACT GGAAGCAAAT GACTTCAACG TTAACTACTT CACTTTCGAT
CTGGCAATCG GTAACGCACC AACCGTGAAC ATCACCGCTC CTGTGAATGG CGAAACCTTT
GTCACCAATT CCGATATCCT CCTGAAAGCA AATGCTGCAG ATTCAGACGG ATCTATCAGA
AAAGTGGAAT TCTTCCAGGG TGCTACTAAA ATCGGAGAAG ATACAACTGC TCCTTACCAG
TTCCTCTGGA CAGGCGTTGC CACCGGCGCT TACAGCATCA CTGCAAAAGC AACCGACAAC
ACACAGATGA CAGCTACCTC CACTCCTGTC GCCATCAACG TAACCGCTGC CGCTGTTGAA
AAAACAGTAC CAGGACATAT CGAAGCAGAA AGCTTTGATG CCATGTCCGG CATCCAGACA
GAAGGTTGCG GAGATACCGG CGGTGGTGAA AACATCGGCT GGGTAGATAC CGGCGACTGG
ATGGATTATT TCGTTAACGT TACCGCAGCA GGTAGCTATA ACGCATCCTT CCGCGTAGCC
AGCGCACCAG GTGGTGGTCA GCTGCAGCTG CAGGCAGGCG CTAATATCCT GACTACTGTT
GACGTACCAG CTACCGGCGG ATGGCAGGCA TGGACTACTA TCACTAAAAC AGTCTCCCTG
ACAGCAGGTA AACAGACATT ACGTGTATAT GCGTCACATG CAGACTTCAA CCTGAACTGG
ATTGAATTCG CTGCTACGAC ACAAGCGGCA AGAACATCAG CCGTAGTAGA ACAGAAACCT
TCTATCAGAA TGTATCCAAA CCCGGTTGTG AATCTGCTGA CAGTAGGTAA CGTGAAAGGC
GATGGTCTGT TCACTATTAC CAATGTCGCT ACCTCACAGA CGATCATCAT CAAGGCGACC
AATGGTATAC TTGACGTAAG CAACCTGACA CCAGGTGTTT ATGTACTTAA ATTCACCAAT
AATGGAAAAC CTGTAACGAA GAAATTCGTG AAGATGTAG
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| Protein sequence | MKKNLLLTFH KRFFTACFGI ALLAASTDRA YSQVPTGFTL KKLTDNSIVE ATAMAHSADG
RIFMAERGGK VKVYQNGTVS TVYTAQTVTD AEQGLLGITL HPQFTSNGRC YIFYTNREMT
RHYLDILFIN QANGVDSVRR VMEFDQIING AHNGGALLFR RNLLYVAIGE SNEAIESPKL
TTYRGKILRL TEDGQPAPGN PYYDTPNATR QQRSIWARGM RNPWRMSLDP VSQRIFVVDV
GGDYEEINDV TNPDPARGYN YGWDQNHKTG YQPDTTTTIP PVYFYDHSED KGGCAITSGV
FFNPPATNYP PQYLNKFFFS DWCRDWYRFV DINGLKPSSQ FTEFSAKNFT RILGTSVGID
GNIYYISYAG DGSLYRIEYN NNQAPSIVNQ PENKTVTAGD AVSFSVTASG GTPLSFQWQK
NGVNIAGATA ATYSIAQTTQ ADSGQYRCVV TNPISTINSN SAKLTVLPFN ARPVPKILTP
AATLTWNVGT IVNYSATATD AEDGTLPDSA YTWEARFYHK DTPTSEHWHP GPTLTKGVKT
GSFTADNLGE SSPNIWFRLM LTVKDSNGRT GVDSVDVYPN KVQVTAASNI PGISLVLGSK
EVTPFTKTMV VNSLTTLQAV TPQLLGDTTY DFVSWAHGGD ALQSIRVPAK DTVFRATYKA
GASRQNPYPD PAVPSTIPGK IEIENFDYGG EGIAYHDESA ANQGNQYRTT EGVDLENCAE
GGFNIGYVNN GEWLEYTANV TVTGKYTFSA RIANPGTAKT LHVEMDGVNI TGTVTVPTTG
GFQAWQTVST TTTQSLPAGI HVFRIVLEAN DFNVNYFTFD LAIGNAPTVN ITAPVNGETF
VTNSDILLKA NAADSDGSIR KVEFFQGATK IGEDTTAPYQ FLWTGVATGA YSITAKATDN
TQMTATSTPV AINVTAAAVE KTVPGHIEAE SFDAMSGIQT EGCGDTGGGE NIGWVDTGDW
MDYFVNVTAA GSYNASFRVA SAPGGGQLQL QAGANILTTV DVPATGGWQA WTTITKTVSL
TAGKQTLRVY ASHADFNLNW IEFAATTQAA RTSAVVEQKP SIRMYPNPVV NLLTVGNVKG
DGLFTITNVA TSQTIIIKAT NGILDVSNLT PGVYVLKFTN NGKPVTKKFV KM
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