| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5110 |
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| Symbol | |
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| ID | 8361286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6372424 |
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| End bp | 6375324 |
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| Gene Length | 2901 bp |
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| Protein Length | 966 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967258 |
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| Product | Two component regulator three Y domain protein |
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| Protein accession | YP_003124743 |
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| Protein GI | 256424090 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.58811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.312264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGC TTTTTCTGCT TGTGCTGTCT ATCCTATGGA GCAACCTGCT CATCGCACAA
CAAATAATCG GGCTACCGCC TGTGATCAAT TATACCCGTC AGCAATATCC TGGTGGCGGG
CAAACCTGGG ACCTGGATAT GGACCGGAAT GGCATCCTTT ACTTTGCCAA CAATGAAGGG
CTGATGACCT TCAACGGTCA TTCCTGGAAA TTACTGCCCG TTCCTAACCA TACCCGGCTA
AGGGCTGTCA AAACAGCTAA AGACGGCCGG ATCTATATCG GCGCACAGGA TGATTTCGGT
TATTACCTGG CGGATGCGGA TGGCGTGTTA CGGTATACCT CCCTCAAACC GGTCGTCAGG
AACCGGAAGG ATCAATTTGC CGATATCTGG GATATTGTGA TCGACGACAG CGGAATCTTC
TTCAGAAGCA CTAACAAGAT CTTTCACTAC GATCATAAAA CATTACATGT TTATCCCGCC
CAGGCGGAAT GGCAGGTGTT ACGCCGTGCC GGCGGACAAC TATATGCCCA GGATGCAGCC
AGGGGATTAT TACGATTCCG GAACGGCCAA TGGCAACCTG TCTGTACAGC GATCGCCAGT
CAGCGCCTGC TGATCAGGGA AATCCTGGAT TACGGAAAGG ACACCCTATT GATCTGCACC
TTAAAAAACG GTCTATTCAA ATTACATGGC GGTGAGCTGT TACCGTTCCG GACAGCAGCG
GATGGCATAT TTACCGAAAA ACAAATCTAC TGTGCGAAGA ACTGGGGCGA TAGTGACAAA
CAATTACTTG TAGGCACCTC CTATGGTGGT TGCTATATTA TTAATAGTAC TACAGGGCAT
ATTATCCAAC GGTTTACGGT GGATGAAGGC TTACAGCATA ACAGTGTACT GAAGATCTTT
ACAGATCCTG CCAGGAATAT CTGGCTAACG CTGGATAATG GTATTGATAT GGTGCGGTAT
AATACGGCGG TGAAACAGAT TCTGCCGGAT GGCCAGCGAT ATCTTACTTC TTATACGGCG
GCGATATTTA AGGAGCAGTT GTATATAGGT ACTTCGGATG GCGTTTTTGC GACACCGCTG
GGTAACCGGA AAGACCTGAG TTTTCAGGAA GGAAATTTCC GGCGGATCAG ACATACGCAG
GGACAGGTAT GGAACCTGAG TCAGATAGGC TCACATTTAC TAATGGGGCA TCATGAAGGC
GCTTTTGAGA TTGACGGACA GGACGCCAGA TTAGTCTCCA AACTGACAGG AAGCTGGTTG
TTCCGCCCCT TCTCTTCCCA TATACTCTCA GGAGGATATA ACGGACTGCA ATTGATCAAA
GAGGATGGTA GTCAGCTAGG TGGCGCTGTC AGGGTACGAG GTTTGTTTGA ATCGTTCCGC
TTTCTGACAG TGGAAGACGA TAGTATTGTC TGGTCTTCGC ATCCTTACAG GGGGGTATTC
AGGATGCATG TAGCAGAAGA CAGTCTGCTA CAGTACACGC TTTTTACCAG CAAAGACGGT
CTGCCTTCCG ACTATAACAA TTTTGTATTC CGGATCAGGA ACCGGACCCT GGTGGCCACA
CAGGCAGGGG TATATGAATA TGATGCCAGG AAGCGGCATT TTGTCCCTTC TCCCTGGTTA
TATCCTGTAC TAAAGAATAT TCCTTTACAA CACCTGGCGG AAGATGCTAC GGGTAATGTC
TGGTTTGTTT CTGATAAGAT GCCGGGTGTA ATTGATTTTC ACAAGCCGTT ACCGGAGCAC
CCTTATAGTA TTGTGTATTT CCCGGAACTG AAAGGTCAGG TGGTGAGCGG ATTTGAGTTC
CTTTATCCAT ATGACGACGA GAACATTTTT GTGGGTGCGG AGAAAGGGAT GTATCACATT
AACTATAAGC ATTACCGTCA TTCGAGGGAG TTGCCGGTTG TGCTGATTGG TCAGGTCAGC
GCACATGGGA AAAGGGACAG TCTTTTATTC GGCGGGTATC ATCCCCCGGG AAAGCATTCT
TTCAAGGCGA TGCCCAATGC ATTTTCGGGT TTTCACTTTG AGTATGCTTC ACCGATATAC
AGTCAGGGGA ATACCATCTT CTACAGTTAC CGGCTGGCCG GTTTTGACCA GGGATGGAGT
GAGTGGTCGG TAAAAACGGA AAAAGACTAC ACCAATCTGC CGCATGGTTA TTACGCTTTT
TCTGTGCGGG CGAAGGACAA CCTGGGGAAT GTATCCCGTC CGGCAGTATA TGCATTCCGG
ATATTACCTG CCTGGTATCA GACAGGGCTC GCTAAAAGTC TGTATGTGTT GAGCGGACTC
GCCTTACTGC TCTGGGGCTA TATCTATCAG AAGAAAAAAT TCATCCGTCA GCGAAAGCGT
TATCAGCAGA AACAGGAGCA GCTGATCTTA CGGTACCGGT TTGAAAAAGA GCAAAGAGAG
AAAGACCTGA TCAGTCTGCA GAATGAAAAG CTGACAGCGG AAGTTCGTTT TAAAAACAGG
GAGCTGGCGA CGGCTACGAT GTACCTGCTA CACAGGGGCA AGGTCTTATC GAATATCAAG
GAAGAACTGT TGAGTGCTAT GAAGAAGTTA GACTCACCGG AAGGGGCTTT TAAAAAAGTA
ATGCGTTTGT TTGAAGAGGC GGAAAACAAT GAAGAGGACT GGGAGCAATT TTCCCGGCAT
TTTGATGAAG TGCATAACAA TTTCCTGTTT AAGCTGAAAC GTCGTTACCC GGAGCTGAGT
ACGACTGATC TGAAACTCTG TGCATATCTG CGCATCAATC TGACGACGAA AGAAATTGCA
CAGTCACTGG GGATTTCTGT CCGTGGAGTA GAAACAAGCA GATACCGGCT GCGCAAGAAA
CTGGAATTAC CGGCGGAGGT CAGCCTATAT GACTTTCTGC TGGCGGTGGC GGATGATCAG
GTAAGACCGG CACAATCATG A
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| Protein sequence | MNKLFLLVLS ILWSNLLIAQ QIIGLPPVIN YTRQQYPGGG QTWDLDMDRN GILYFANNEG
LMTFNGHSWK LLPVPNHTRL RAVKTAKDGR IYIGAQDDFG YYLADADGVL RYTSLKPVVR
NRKDQFADIW DIVIDDSGIF FRSTNKIFHY DHKTLHVYPA QAEWQVLRRA GGQLYAQDAA
RGLLRFRNGQ WQPVCTAIAS QRLLIREILD YGKDTLLICT LKNGLFKLHG GELLPFRTAA
DGIFTEKQIY CAKNWGDSDK QLLVGTSYGG CYIINSTTGH IIQRFTVDEG LQHNSVLKIF
TDPARNIWLT LDNGIDMVRY NTAVKQILPD GQRYLTSYTA AIFKEQLYIG TSDGVFATPL
GNRKDLSFQE GNFRRIRHTQ GQVWNLSQIG SHLLMGHHEG AFEIDGQDAR LVSKLTGSWL
FRPFSSHILS GGYNGLQLIK EDGSQLGGAV RVRGLFESFR FLTVEDDSIV WSSHPYRGVF
RMHVAEDSLL QYTLFTSKDG LPSDYNNFVF RIRNRTLVAT QAGVYEYDAR KRHFVPSPWL
YPVLKNIPLQ HLAEDATGNV WFVSDKMPGV IDFHKPLPEH PYSIVYFPEL KGQVVSGFEF
LYPYDDENIF VGAEKGMYHI NYKHYRHSRE LPVVLIGQVS AHGKRDSLLF GGYHPPGKHS
FKAMPNAFSG FHFEYASPIY SQGNTIFYSY RLAGFDQGWS EWSVKTEKDY TNLPHGYYAF
SVRAKDNLGN VSRPAVYAFR ILPAWYQTGL AKSLYVLSGL ALLLWGYIYQ KKKFIRQRKR
YQQKQEQLIL RYRFEKEQRE KDLISLQNEK LTAEVRFKNR ELATATMYLL HRGKVLSNIK
EELLSAMKKL DSPEGAFKKV MRLFEEAENN EEDWEQFSRH FDEVHNNFLF KLKRRYPELS
TTDLKLCAYL RINLTTKEIA QSLGISVRGV ETSRYRLRKK LELPAEVSLY DFLLAVADDQ
VRPAQS
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